DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VGGTPRDS
Uniprot ID:
P48634
Source protein:
Protein PRRC2A
Source gene:
PRRC2A
Class:
DEG_SCF_FBW7_1
Location:
1543:1550
E3 ligase:
FBXW7
DEGRON score:
0.9736
ASA_SCORE:
85.125
COIL:
0.9391
CONS_SCORE:
0.4514
DSS_SCORE:
0.7243
HELIX:
0.0376
FCONS_SCORE:
0.9781
RIG_SCORE:
0.5463
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1552E
TCGA-2H-A9GO
ESCA
TCGA
VGGTPRDS
DEG_SCF_FBW7_1
0.2778
p.A1551S
TCGA-69-7978
LUAD
TCGA
VGGTPRDS
DEG_SCF_FBW7_1
0.3056
p.A1551S
DO24920
LUAD
ICGC
VGGTPRDS
DEG_SCF_FBW7_1
0.3056
p.R1560C
TCGA-B5-A3FC
UCEC
TCGA
VGGTPRDS
DEG_SCF_FBW7_1
0.0556
p.R1560C
DO41871
UCEC
ICGC
VGGTPRDS
DEG_SCF_FBW7_1
0.0556
p.G1552R
DO50329
ESAD
ICGC
VGGTPRDS
DEG_SCF_FBW7_1
0.2778
p.R1548W
DO233737
GACA
ICGC
VGGTPRDS
DEG_SCF_FBW7_1
0.7523
p.P1558S
DO220878
MELA
ICGC
VGGTPRDS
DEG_SCF_FBW7_1
0.1111
p.PP1557PS
DO220878
MELA
ICGC
VGGTPRDS
DEG_SCF_FBW7_1
0
p.P1557T
SIDM01578
Bladder Carcinoma
GDSC
VGGTPRDS
DEG_SCF_FBW7_1
0.1389
p.P1557T
ACH-000862
Bladder Cancer
CCLE
VGGTPRDS
DEG_SCF_FBW7_1
0.1389
p.V1543L
ACH-000710
Lung Cancer
CCLE
VGGTPRDS
DEG_SCF_FBW7_1
0.5654
Drug responses associated with PRRC2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGGTPRDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48634
Protein PRRC2A
DEG_SCF_FBW7_1
1543:1550
VGGTPRDS
FBXW7
0.9736
More...