DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VGIYND
Uniprot ID:
Q9H5V8
Source protein:
CUB domain-containing protein 1
Source gene:
CDCP1
Class:
LIG_APCC_ABBA_1
Location:
704:709
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8959
ASA_SCORE:
51.4333
COIL:
0.5737
CONS_SCORE:
0.7588
DSS_SCORE:
0.461
HELIX:
0.0277
FCONS_SCORE:
1.284
RIG_SCORE:
0.7852
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P716A
TCGA-23-1118
OV
TCGA
VGIYND
LIG_APCC_ABBA_1
0.1389
p.P716A
DO30220
OV
ICGC
VGIYND
LIG_APCC_ABBA_1
0.1389
p.N699S
TCGA-EE-A2GP
SKCM
TCGA
VGIYND
LIG_APCC_ABBA_1
0.1944
p.N699S
DO37422
SKCM
ICGC
VGIYND
LIG_APCC_ABBA_1
0.1944
p.D709G
DO229010
COCA
ICGC
VGIYND
LIG_APCC_ABBA_1
0.7198
p.D709G
DO229013
COCA
ICGC
VGIYND
LIG_APCC_ABBA_1
0.7198
p.D709G
DO229016
COCA
ICGC
VGIYND
LIG_APCC_ABBA_1
0.7198
p.D709G
DO229003
COCA
ICGC
VGIYND
LIG_APCC_ABBA_1
0.7198
p.D709G
DO229005
COCA
ICGC
VGIYND
LIG_APCC_ABBA_1
0.7198
p.E714D
DO233270
GACA
ICGC
VGIYND
LIG_APCC_ABBA_1
0.1944
p.N710K
DO228924
LICA
ICGC
VGIYND
LIG_APCC_ABBA_1
0.3056
p.K695E
DO228371
MALY
ICGC
VGIYND
LIG_APCC_ABBA_1
0.1944
p.K695E
SIDM01008
B-Cell Non-Hodgkin's Lymphoma
GDSC
VGIYND
LIG_APCC_ABBA_1
0.1944
p.K695E
KARPAS-422
haematopoietic_and_lymphoid_tissue
COSMIC
VGIYND
LIG_APCC_ABBA_1
0.1944
p.E714K
DO229456
SKCA
ICGC
VGIYND
LIG_APCC_ABBA_1
0.1944
p.A703T
SIDM00216
Colorectal Carcinoma
GDSC
VGIYND
LIG_APCC_ABBA_1
0.3056
p.A703T
SIDM00018
Acute Myeloid Leukemia
GDSC
VGIYND
LIG_APCC_ABBA_1
0.3056
p.A703T
SIDM01569
Hepatocellular Carcinoma
GDSC
VGIYND
LIG_APCC_ABBA_1
0.3056
p.A703T
SNU-175
large_intestine
COSMIC
VGIYND
LIG_APCC_ABBA_1
0.3056
p.A703T
KO52
haematopoietic_and_lymphoid_tissue
COSMIC
VGIYND
LIG_APCC_ABBA_1
0.3056
Drug responses associated with CDCP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGIYND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H5V8
CUB domain-containing protein 1
LIG_APCC_ABBA_1
704:709
VGIYND
APC,CDC20,FZR1
0.8959
More...