DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGKTPEAS
Uniprot ID:
Q99460
Source protein:
26S proteasome non-ATPase regulatory subunit 1
Source gene:
PSMD1
Class:
DEG_SCF_FBW7_1
Location:
308:315
E3 ligase:
FBXW7
DEGRON score:
0.8948
ASA_SCORE:
73.325
COIL:
0.8528
CONS_SCORE:
0.239
DSS_SCORE:
0.7043
HELIX:
0.0969
FCONS_SCORE:
0.9158
RIG_SCORE:
0.6334
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E300Q
TCGA-E2-A10C
BRCA
TCGA
VGKTPEAS
DEG_SCF_FBW7_1
0.1111
p.E300Q
DO1334
BRCA
ICGC
VGKTPEAS
DEG_SCF_FBW7_1
0.1111
p.F307L
TCGA-VQ-A8P3
STAD
TCGA
VGKTPEAS
DEG_SCF_FBW7_1
0.3056
p.F307L
DO51762
STAD
ICGC
VGKTPEAS
DEG_SCF_FBW7_1
0.3056
p.S305I
DO229028
LICA
ICGC
VGKTPEAS
DEG_SCF_FBW7_1
0.6944
p.G309V
DO229035
LICA
ICGC
VGKTPEAS
DEG_SCF_FBW7_1
0.6421
p.E313Q
SIDM00963
Breast Carcinoma
GDSC
VGKTPEAS
DEG_SCF_FBW7_1
0.5633
p.E313Q
ACH-000927
Breast Cancer
CCLE
VGKTPEAS
DEG_SCF_FBW7_1
0.5633
p.E313Q
BT-474
breast
COSMIC
VGKTPEAS
DEG_SCF_FBW7_1
0.5633
p.E313K
ACH-000489
Colon/Colorectal Cancer
CCLE
VGKTPEAS
DEG_SCF_FBW7_1
0.591
Drug responses associated with PSMD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGKTPEAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99460
26S proteasome non-ATPase regulatory subunit 1
DEG_SCF_FBW7_1
308:315
VGKTPEAS
FBXW7
0.8948
More...