DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGKTPPST
Uniprot ID:
Q9ULU4
Source protein:
Protein kinase C-binding protein 1
Source gene:
ZMYND8
Class:
DEG_SCF_FBW7_1
Location:
743:750
E3 ligase:
FBXW7
DEGRON score:
0.7823
ASA_SCORE:
91.2875
COIL:
0.9505
CONS_SCORE:
0.3945
DSS_SCORE:
0.7942
HELIX:
0.019
FCONS_SCORE:
0.9412
RIG_SCORE:
0.5604
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D736Y
TCGA-AP-A051
UCEC
TCGA
VGKTPPST
DEG_SCF_FBW7_1
0.1389
p.R744W
TCGA-HU-A4GQ
STAD
TCGA
VGKTPPST
DEG_SCF_FBW7_1
0.8634
p.S756C
DO218173
BRCA
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.6111
p.V752A
DO227999
COCA
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.V752A
DO229013
COCA
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.V752A
DO229016
COCA
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.V752A
DO233628
GACA
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.V752A
DO229346
LAML
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.V752A
DO229353
LAML
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.V752A
DO228941
LICA
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.V752A
DO228947
LICA
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.V752A
DO231102
LUSC
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.Q740K
DO229024
LICA
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.25
p.T750S
DO26842
LUSC
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.7116
p.D741Y
DO47120
RECA
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.2778
p.P747S
DO48652
SKCM
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.6752
p.P747S
DO51254
SKCM
ICGC
VGKTPPST
DEG_SCF_FBW7_1
0.6752
p.G750R
SIDM00181
Bladder Carcinoma
GDSC
VGKTPPST
DEG_SCF_FBW7_1
0.7568
p.G750R
LB831-BLC
urinary_tract
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.7568
p.S749A
SIDM00274
Gastric Carcinoma
GDSC
VGKTPPST
DEG_SCF_FBW7_1
0.6477
p.S749A
GCIY
stomach
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.6477
p.D733E
SIDM00490
Glioma
GDSC
VGKTPPST
DEG_SCF_FBW7_1
0.0556
p.D733E
Becker
central_nervous_system
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.0556
p.T749M
ACH-000493
Liver Cancer
CCLE
VGKTPPST
DEG_SCF_FBW7_1
0.7423
p.T749M
ACH-000967
Colon/Colorectal Cancer
CCLE
VGKTPPST
DEG_SCF_FBW7_1
0.7423
p.T749M
ACH-001199
Colon/Colorectal Cancer
CCLE
VGKTPPST
DEG_SCF_FBW7_1
0.7423
p.T749M
SNU-423
liver
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.7423
p.T749M
SNU-C2B
large_intestine
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.7423
p.Q739H
ACH-002199
Kidney Cancer
CCLE
VGKTPPST
DEG_SCF_FBW7_1
0.3333
p.Q739H
SN12C
kidney
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.3333
p.G743R
LB831-BLC
urinary_tract
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.7568
p.T754M
SNU-423
liver
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.6667
p.T754M
SNU-C2B
large_intestine
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.6667
p.S742A
GCIY
stomach
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.3056
p.K740N
Farage
haematopoietic_and_lymphoid_tissue
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.25
p.A742T
NCI-H441
lung
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.3056
p.L745F
SW403
large_intestine
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.6981
p.T736M
NCI-H23
lung
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.1389
p.Q744H
SN12C
kidney
COSMIC
VGKTPPST
DEG_SCF_FBW7_1
0.7582
Drug responses associated with ZMYND8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGKTPPST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULU4
Protein kinase C-binding protein 1
DEG_SCF_FBW7_1
743:750
VGKTPPST
FBXW7
0.7823
More...