DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGPFSD
Uniprot ID:
O14490
Source protein:
Disks large-associated protein 1
Source gene:
DLGAP1
Class:
LIG_APCC_ABBA_1
Location:
58:63
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9968
ASA_SCORE:
59.7
COIL:
0.922
CONS_SCORE:
0.3458
DSS_SCORE:
0.4299
HELIX:
0.0233
FCONS_SCORE:
0.7948
RIG_SCORE:
0.705
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V58M
TCGA-31-1950
OV
TCGA
VGPFSD
LIG_APCC_ABBA_1
0.6097
p.V58M
TCGA-CK-6746
COAD
TCGA
VGPFSD
LIG_APCC_ABBA_1
0.6097
p.V58M
TCGA-KK-A59V
PRAD
TCGA
VGPFSD
LIG_APCC_ABBA_1
0.6097
p.V58M
TCGA-VQ-A91D
STAD
TCGA
VGPFSD
LIG_APCC_ABBA_1
0.6097
p.V58M
DO7938
COAD
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.6097
p.V58M
DO233215
GACA
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.6097
p.V58M
DO30980
OV
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.6097
p.V58M
DO51346
PRAD
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.6097
p.V58M
DO51783
STAD
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.6097
p.R50L
TCGA-85-6561
LUSC
TCGA
VGPFSD
LIG_APCC_ABBA_1
0.1111
p.R50L
TCGA-BF-A1PZ
SKCM
TCGA
VGPFSD
LIG_APCC_ABBA_1
0.1111
p.R50L
DO26518
LUSC
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.1111
p.R50L
DO50279
SKCM
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.1111
p.A55S
TCGA-CG-5723
STAD
TCGA
VGPFSD
LIG_APCC_ABBA_1
0.25
p.A55S
DO38376
STAD
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.25
p.R71K
DO514
BLCA
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.1111
p.R70Q
DO7810
COAD
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.1389
p.R70Q
DO233804
GACA
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.1389
p.E52D
DO9602
COAD
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.6111
p.T59M
DO229003
COCA
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.7423
p.T59M
DO43098
UCEC
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.7423
p.A69P
DO233937
GACA
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.1667
p.S68R
DO229037
LICA
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.1944
p.T48I
DO52171
LIHC
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.0556
p.D56N
DO228858
MALY
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.2778
p.P61S
DO222875
MELA
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.6752
p.P61S
DO229459
SKCA
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.6752
p.A48V
DO42608
UCEC
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.0556
p.S64F
DO43755
UCEC
ICGC
VGPFSD
LIG_APCC_ABBA_1
0.3056
p.R50Q
SIDM00323
B-Cell Non-Hodgkin's Lymphoma
GDSC
VGPFSD
LIG_APCC_ABBA_1
0.1111
p.R50Q
ACH-002313
Lymphoma
CCLE
VGPFSD
LIG_APCC_ABBA_1
0.1111
p.R50Q
TK
haematopoietic_and_lymphoid_tissue
COSMIC
VGPFSD
LIG_APCC_ABBA_1
0.1111
p.A69V
EFO-27
ovary
COSMIC
VGPFSD
LIG_APCC_ABBA_1
0.1667
p.R70W
NAMALWA
haematopoietic_and_lymphoid_tissue
COSMIC
VGPFSD
LIG_APCC_ABBA_1
0.1389
p.M57I
HuP-T3
pancreas
COSMIC
VGPFSD
LIG_APCC_ABBA_1
0.3056
p.M49I
HuP-T3
pancreas
COSMIC
VGPFSD
LIG_APCC_ABBA_1
0.0833
p.M59I
HuP-T3
pancreas
COSMIC
VGPFSD
LIG_APCC_ABBA_1
0.7618
p.M63I
HuP-T3
pancreas
COSMIC
VGPFSD
LIG_APCC_ABBA_1
0.7618
Drug responses associated with DLGAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGPFSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14490
Disks large-associated protein 1
LIG_APCC_ABBA_1
58:63
VGPFSD
APC,CDC20,FZR1
0.9968
More...