DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VGPYDE
Uniprot ID:
Q96GK7
Source protein:
Fumarylacetoacetate hydrolase domain-containing protein 2A
Source gene:
FAHD2A
Class:
LIG_APCC_ABBA_1
Location:
141:146
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6557
ASA_SCORE:
58.65
COIL:
0.7713
CONS_SCORE:
0.4627
DSS_SCORE:
0.2007
HELIX:
0.0298
FCONS_SCORE:
0.8899
RIG_SCORE:
0.7914
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y144C
SIDM00524
Small Cell Lung Carcinoma
GDSC
VGPYDE
LIG_APCC_ABBA_1
0.7087
p.Y144C
ACH-000703
Lung Cancer
CCLE
VGPYDE
LIG_APCC_ABBA_1
0.7087
p.Y144C
DMS-79
lung
COSMIC
VGPYDE
LIG_APCC_ABBA_1
0.7087
p.E146K
TCGA-CR-7369
HNSC
TCGA
VGPYDE
LIG_APCC_ABBA_1
0.7022
p.E146K
DO14934
HNSC
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.7022
p.P143S
TCGA-AX-A0J1
UCEC
TCGA
VGPYDE
LIG_APCC_ABBA_1
0.6752
p.P143S
DO41199
UCEC
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.6752
p.G142W
SIDM01617
Endometrial Carcinoma
GDSC
VGPYDE
LIG_APCC_ABBA_1
0.6714
p.G142R
TCGA-FT-A3EE
BLCA
TCGA
VGPYDE
LIG_APCC_ABBA_1
0.6457
p.G142R
DO720
BLCA
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.6457
p.G142R
DO50970
LICA
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.6457
p.D145Y
DO229229
THCA
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.6214
p.V141M
TCGA-A5-A0G5
UCEC
TCGA
VGPYDE
LIG_APCC_ABBA_1
0.6097
p.V141M
TCGA-BR-8487
STAD
TCGA
VGPYDE
LIG_APCC_ABBA_1
0.6097
p.V141M
DO47867
STAD
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.6097
p.V141M
DO41416
UCEC
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.6097
p.V141M
SIDM01297
Colorectal Carcinoma
GDSC
VGPYDE
LIG_APCC_ABBA_1
0.6097
p.I140V
TCGA-77-7463
LUSC
TCGA
VGPYDE
LIG_APCC_ABBA_1
0.3056
p.I140V
DO26716
LUSC
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.3056
p.S139F
TCGA-AC-A5XS
BRCA
TCGA
VGPYDE
LIG_APCC_ABBA_1
0.2778
p.S139F
DO50023
BRCA
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.2778
p.A137V
TCGA-BR-4184
STAD
TCGA
VGPYDE
LIG_APCC_ABBA_1
0.2222
p.A137V
DO38328
STAD
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.2222
p.F136C
TCGA-19-5956
GBM
TCGA
VGPYDE
LIG_APCC_ABBA_1
0.1944
p.F136C
DO13863
GBM
ICGC
VGPYDE
LIG_APCC_ABBA_1
0.1944
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Drug responses associated with FAHD2A mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VGPYDE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96GK7
Fumarylacetoacetate hydrolase domain-containing protein 2A
LIG_APCC_ABBA_1
141:146
VGPYDE
APC,CDC20,FZR1
0.6557
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