DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGTPIAS
Uniprot ID:
Q99460
Source protein:
26S proteasome non-ATPase regulatory subunit 1
Source gene:
PSMD1
Class:
DEG_SCF_FBW7_1
Location:
271:277
E3 ligase:
FBXW7
DEGRON score:
0.9982
ASA_SCORE:
67.3286
COIL:
0.9034
CONS_SCORE:
0.2633
DSS_SCORE:
0.4107
HELIX:
0.036
FCONS_SCORE:
0.8114
RIG_SCORE:
0.7248
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A276S
TCGA-CC-5259
LIHC
TCGA
VGTPIAS
DEG_SCF_FBW7_1
0.6477
p.A276S
DO44886
LIHC
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.6477
p.I275V
TCGA-DX-A7ES
SARC
TCGA
VGTPIAS
DEG_SCF_FBW7_1
0.5965
p.I275V
DO220036
SARC
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.5965
p.I265F
DO229323
BTCA
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.1667
p.L261F
DO229029
LICA
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.0556
p.V264L
DO229027
LICA
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.1389
p.G272V
DO229026
LICA
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.6421
p.V271F
DO229031
LICA
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.7068
p.T284M
DO229053
LICA
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.5833
p.N267S
DO231043
LUSC
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.2222
p.G272S
DO228238
MALY
ICGC
VGTPIAS
DEG_SCF_FBW7_1
0.5882
p.R269Q
SIDM00186
Kidney Carcinoma
GDSC
VGTPIAS
DEG_SCF_FBW7_1
0.2778
p.R269Q
SIDM00046
Non-Small Cell Lung Carcinoma
GDSC
VGTPIAS
DEG_SCF_FBW7_1
0.2778
p.R269Q
SIDM01651
Non-Cancerous
GDSC
VGTPIAS
DEG_SCF_FBW7_1
0.2778
p.R269Q
SIDM00920
Breast Carcinoma
GDSC
VGTPIAS
DEG_SCF_FBW7_1
0.2778
p.R269Q
SIDM00673
Breast Carcinoma
GDSC
VGTPIAS
DEG_SCF_FBW7_1
0.2778
p.T286A
SIDM00451
T-Lymphoblastic Leukemia
GDSC
VGTPIAS
DEG_SCF_FBW7_1
0.0833
p.T286A
ACH-000937
Leukemia
CCLE
VGTPIAS
DEG_SCF_FBW7_1
0.0833
p.T286A
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
VGTPIAS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with PSMD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGTPIAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99460
26S proteasome non-ATPase regulatory subunit 1
DEG_SCF_FBW7_1
271:277
VGTPIAS
FBXW7
0.9982
More...