DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGTPQST
Uniprot ID:
P54274
Source protein:
Telomeric repeat-binding factor 1
Source gene:
TERF1
Class:
DEG_SCF_FBW7_1
Location:
342:348
E3 ligase:
FBXW7
DEGRON score:
0.994
ASA_SCORE:
79.9857
COIL:
0.8153
CONS_SCORE:
0.3735
DSS_SCORE:
0.7692
HELIX:
0.1661
FCONS_SCORE:
0.996
RIG_SCORE:
0.629
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R356G
TCGA-17-Z058
LUAD
TCGA
VGTPQST
DEG_SCF_FBW7_1
0.1111
p.P345H
TCGA-EE-A183
SKCM
TCGA
VGTPQST
DEG_SCF_FBW7_1
0.7694
p.D334N
TCGA-F5-6814
READ
TCGA
VGTPQST
DEG_SCF_FBW7_1
0.1111
p.V344F
DO228948
LICA
ICGC
VGTPQST
DEG_SCF_FBW7_1
0.7068
p.S334I
DO229015
LICA
ICGC
VGTPQST
DEG_SCF_FBW7_1
0.1111
p.S334I
DO229024
LICA
ICGC
VGTPQST
DEG_SCF_FBW7_1
0.1111
p.P352H
DO26552
LUSC
ICGC
VGTPQST
DEG_SCF_FBW7_1
0.3333
p.I342M
DO50118
STAD
ICGC
VGTPQST
DEG_SCF_FBW7_1
0.7618
p.P343A
DO229213
THCA
ICGC
VGTPQST
DEG_SCF_FBW7_1
0.7503
p.P349S
DO42177
UCEC
ICGC
VGTPQST
DEG_SCF_FBW7_1
0.3056
p.N336H
SIDM00537
Colorectal Carcinoma
GDSC
VGTPQST
DEG_SCF_FBW7_1
0.1667
p.N336H
ACH-001345
Colon/Colorectal Cancer
CCLE
VGTPQST
DEG_SCF_FBW7_1
0.1667
p.N336H
GP5d
large_intestine
COSMIC
VGTPQST
DEG_SCF_FBW7_1
0.1667
p.D334E
SIDM00863
Burkitt's Lymphoma
GDSC
VGTPQST
DEG_SCF_FBW7_1
0.1111
Drug responses associated with TERF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGTPQST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54274
Telomeric repeat-binding factor 1
DEG_SCF_FBW7_1
342:348
VGTPQST
FBXW7
0.994
More...