DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGTPRME
Uniprot ID:
Q8TER5
Source protein:
Rho guanine nucleotide exchange factor 40
Source gene:
ARHGEF40
Class:
DEG_SCF_FBW7_2
Location:
1072:1078
E3 ligase:
FBXW7
DEGRON score:
0.6717
ASA_SCORE:
80.8143
COIL:
0.6229
CONS_SCORE:
0.2776
DSS_SCORE:
0.5632
HELIX:
0.3411
FCONS_SCORE:
0.7592
RIG_SCORE:
0.725
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1062Q
TCGA-D1-A2G0
UCEC
TCGA
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1062Q
DO43049
UCEC
ICGC
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1062Q
SIDM00281
Other Solid Cancers
GDSC
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1062Q
SIDM01038
B-Cell Non-Hodgkin's Lymphoma
GDSC
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1062Q
SIDM01526
Mesothelioma
GDSC
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1062Q
JEKO-1
haematopoietic_and_lymphoid_tissue
COSMIC
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1062Q
DJM-1
skin
COSMIC
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1079H
TCGA-D5-6530
COAD
TCGA
VGTPRME
DEG_SCF_FBW7_2
0.3056
p.R1079H
DO8312
COAD
ICGC
VGTPRME
DEG_SCF_FBW7_2
0.3056
p.R1079H
SIDM01460
Glioma
GDSC
VGTPRME
DEG_SCF_FBW7_2
0.3056
p.R1079H
ACH-000592
Brain Cancer
CCLE
VGTPRME
DEG_SCF_FBW7_2
0.3056
p.G1073C
TCGA-DI-A1BU
UCEC
TCGA
VGTPRME
DEG_SCF_FBW7_2
0.6489
p.G1073C
DO42023
UCEC
ICGC
VGTPRME
DEG_SCF_FBW7_2
0.6489
p.R1062L
TCGA-GS-A9TT
DLBC
TCGA
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1062L
DO219912
DLBC
ICGC
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.A1085S
DO228976
LICA
ICGC
VGTPRME
DEG_SCF_FBW7_2
0.1389
p.A1063D
DO49199
PACA
ICGC
VGTPRME
DEG_SCF_FBW7_2
0.0833
p.R1079C
DO232224
PBCA
ICGC
VGTPRME
DEG_SCF_FBW7_2
0.3056
p.R1062W
SIDM01051
Ovarian Carcinoma
GDSC
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1062W
ACH-000936
Ovarian Cancer
CCLE
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1062W
EFO-27
ovary
COSMIC
VGTPRME
DEG_SCF_FBW7_2
0.0556
p.R1081Q
ACH-000824
Esophageal Cancer
CCLE
VGTPRME
DEG_SCF_FBW7_2
0.25
Drug responses associated with ARHGEF40 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGTPRME
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TER5
Rho guanine nucleotide exchange factor 40
DEG_SCF_FBW7_2
1072:1078
VGTPRME
FBXW7
0.6717
More...