DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGTTPVSS
Uniprot ID:
Q6ZNJ1
Source protein:
Neurobeachin-like protein 2
Source gene:
NBEAL2
Class:
DEG_SCF_FBW7_1
Location:
2006:2013
E3 ligase:
FBXW7
DEGRON score:
0.9635
ASA_SCORE:
55.4625
COIL:
0.6954
CONS_SCORE:
0.058
DSS_SCORE:
0.4676
HELIX:
0.0573
FCONS_SCORE:
0.2299
RIG_SCORE:
0.6633
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q2016R
TCGA-22-4591
LUSC
TCGA
VGTTPVSS
DEG_SCF_FBW7_1
0.25
p.P2010S
TCGA-GN-A8LK
SKCM
TCGA
VGTTPVSS
DEG_SCF_FBW7_1
0.6752
p.T2008M
SIDM00517
Head and Neck Carcinoma
GDSC
VGTTPVSS
DEG_SCF_FBW7_1
0.7423
p.T2008M
SIDM01009
Neuroblastoma
GDSC
VGTTPVSS
DEG_SCF_FBW7_1
0.7423
p.P2022T
SIDM01218
Other Solid Cancers
GDSC
VGTTPVSS
DEG_SCF_FBW7_1
0.0833
p.P2022T
ACH-001530
Endometrial/Uterine Cancer
CCLE
VGTTPVSS
DEG_SCF_FBW7_1
0.0833
p.P2022T
JEG-3
placenta
COSMIC
VGTTPVSS
DEG_SCF_FBW7_1
0.0833
p.Y1998N
SIDM01735
Biliary Tract Carcinoma
GDSC
VGTTPVSS
DEG_SCF_FBW7_1
0.1111
p.Y1998N
ACH-000808
Bile Duct Cancer
CCLE
VGTTPVSS
DEG_SCF_FBW7_1
0.1111
p.N1997S
ACH-001751
Sarcoma
CCLE
VGTTPVSS
DEG_SCF_FBW7_1
0.0833
p.T2008K
ACH-001992
Primary
CCLE
VGTTPVSS
DEG_SCF_FBW7_1
0.7306
Drug responses associated with NBEAL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGTTPVSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZNJ1
Neurobeachin-like protein 2
DEG_SCF_FBW7_1
2006:2013
VGTTPVSS
FBXW7
0.9635
More...