DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VHIYED
Uniprot ID:
Q13371
Source protein:
Phosducin-like protein
Source gene:
PDCL
Class:
LIG_APCC_ABBA_1
Location:
185:190
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5284
ASA_SCORE:
25.3167
COIL:
0.3565
CONS_SCORE:
0.6187
DSS_SCORE:
0.1284
HELIX:
0.026
FCONS_SCORE:
1.2558
RIG_SCORE:
0.9071
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D190N
TCGA-MP-A4T7
LUAD
TCGA
VHIYED
LIG_APCC_ABBA_1
0.6932
p.D190N
DO45370
LUAD
ICGC
VHIYED
LIG_APCC_ABBA_1
0.6932
p.M184L
DO228531
LICA
ICGC
VHIYED
LIG_APCC_ABBA_1
0.3056
p.P193Q
DO229027
LICA
ICGC
VHIYED
LIG_APCC_ABBA_1
0.25
p.S180N
DO46493
OV
ICGC
VHIYED
LIG_APCC_ABBA_1
0.1944
Drug responses associated with PDCL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHIYED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13371
Phosducin-like protein
LIG_APCC_ABBA_1
185:190
VHIYED
APC,CDC20,FZR1
0.5284
More...