DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VHMFVD
Uniprot ID:
Q8IV76
Source protein:
Circadian clock protein PASD1
Source gene:
PASD1
Class:
LIG_APCC_ABBA_1
Location:
256:261
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5307
ASA_SCORE:
59.8833
COIL:
0.1917
CONS_SCORE:
0.8472
DSS_SCORE:
0.3949
HELIX:
0.0217
FCONS_SCORE:
0.8947
RIG_SCORE:
0.795
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S262Y
TCGA-19-5954
GBM
TCGA
VHMFVD
LIG_APCC_ABBA_1
0.3056
p.S262Y
DO11459
GBM
ICGC
VHMFVD
LIG_APCC_ABBA_1
0.3056
p.Y250D
TCGA-91-6828
LUAD
TCGA
VHMFVD
LIG_APCC_ABBA_1
0.1667
p.Y250D
DO26150
LUAD
ICGC
VHMFVD
LIG_APCC_ABBA_1
0.1667
p.E254D
TCGA-A5-A0GP
UCEC
TCGA
VHMFVD
LIG_APCC_ABBA_1
0.2778
p.E254D
DO41109
UCEC
ICGC
VHMFVD
LIG_APCC_ABBA_1
0.2778
p.E254K
TCGA-AP-A1DV
UCEC
TCGA
VHMFVD
LIG_APCC_ABBA_1
0.2778
p.E254K
DO43186
UCEC
ICGC
VHMFVD
LIG_APCC_ABBA_1
0.2778
p.Q249R
TCGA-C8-A12V
BRCA
TCGA
VHMFVD
LIG_APCC_ABBA_1
0.1389
p.Q249R
DO4044
BRCA
ICGC
VHMFVD
LIG_APCC_ABBA_1
0.1389
p.S262F
TCGA-EE-A3JD
SKCM
TCGA
VHMFVD
LIG_APCC_ABBA_1
0.3056
p.S262F
DO50299
SKCM
ICGC
VHMFVD
LIG_APCC_ABBA_1
0.3056
p.T270R
TCGA-HC-A6HX
PRAD
TCGA
VHMFVD
LIG_APCC_ABBA_1
0.0833
p.T270R
DO46806
PRAD
ICGC
VHMFVD
LIG_APCC_ABBA_1
0.0833
p.Y266H
DO233688
GACA
ICGC
VHMFVD
LIG_APCC_ABBA_1
0.1944
p.S264L
DO220906
MELA
ICGC
VHMFVD
LIG_APCC_ABBA_1
0.25
p.N255I
SIDM00718
Non-Small Cell Lung Carcinoma
GDSC
VHMFVD
LIG_APCC_ABBA_1
0.3056
p.N255I
ACH-000860
Lung Cancer
CCLE
VHMFVD
LIG_APCC_ABBA_1
0.3056
p.N255I
NCI-H358
lung
COSMIC
VHMFVD
LIG_APCC_ABBA_1
0.3056
p.D261Y
SIDM01588
Endometrial Carcinoma
GDSC
VHMFVD
LIG_APCC_ABBA_1
0.7325
p.D261Y
ACH-000993
Endometrial/Uterine Cancer
CCLE
VHMFVD
LIG_APCC_ABBA_1
0.7325
Drug responses associated with PASD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHMFVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IV76
Circadian clock protein PASD1
LIG_APCC_ABBA_1
256:261
VHMFVD
APC,CDC20,FZR1
0.5307
More...