DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VHPFPD
Uniprot ID:
Q12979
Source protein:
Active breakpoint cluster region-related protein
Source gene:
ABR
Class:
LIG_APCC_ABBA_1
Location:
369:374
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6752
ASA_SCORE:
76.75
COIL:
0.7975
CONS_SCORE:
0.4014
DSS_SCORE:
0.6564
HELIX:
0.1805
FCONS_SCORE:
0.9821
RIG_SCORE:
0.6657
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R369C
DO9314
COAD
ICGC
VHPFPD
LIG_APCC_ABBA_1
0.8301
p.R369H
SNU-1040
large_intestine
COSMIC
VHPFPD
LIG_APCC_ABBA_1
0.8244
p.V369A
TCGA-CG-5726
STAD
TCGA
VHPFPD
LIG_APCC_ABBA_1
0.6936
p.K383Q
TCGA-EO-A3AV
UCEC
TCGA
VHPFPD
LIG_APCC_ABBA_1
0.5278
p.K381N
TCGA-D1-A17Q
UCEC
TCGA
VHPFPD
LIG_APCC_ABBA_1
0.25
p.R365W
DO8288
COAD
ICGC
VHPFPD
LIG_APCC_ABBA_1
0.2222
p.R365L
DO37523
SKCM
ICGC
VHPFPD
LIG_APCC_ABBA_1
0.2222
p.R360H
SNU-1040
large_intestine
COSMIC
VHPFPD
LIG_APCC_ABBA_1
0.0833
p.S359F
TCGA-2W-A8YY
CESC
TCGA
VHPFPD
LIG_APCC_ABBA_1
0.0556
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Drug responses associated with ABR mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VHPFPD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12979
Active breakpoint cluster region-related protein
LIG_APCC_ABBA_1
369:374
VHPFPD
APC,CDC20,FZR1
0.6752
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