DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VICTPTEE
Uniprot ID:
Q8NG31
Source protein:
Kinetochore scaffold 1
Source gene:
KNL1
Class:
DEG_SCF_FBW7_2
Location:
1014:1021
E3 ligase:
FBXW7
DEGRON score:
0.9775
ASA_SCORE:
84.1625
COIL:
0.6904
CONS_SCORE:
0.2659
DSS_SCORE:
0.4798
HELIX:
0.0568
FCONS_SCORE:
0.6941
RIG_SCORE:
0.7755
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1022I
SIDM00698
Small Cell Lung Carcinoma
GDSC
VICTPTEE
DEG_SCF_FBW7_2
0.3056
p.S1022I
NCI-H146
lung
COSMIC
VICTPTEE
DEG_SCF_FBW7_2
0.3056
p.R1006K
SIDM00571
Pancreatic Carcinoma
GDSC
VICTPTEE
DEG_SCF_FBW7_2
0.1111
p.R1006K
KP-3
pancreas
COSMIC
VICTPTEE
DEG_SCF_FBW7_2
0.1111
p.S1008N
SIDM00493
Other Solid Cancers
GDSC
VICTPTEE
DEG_SCF_FBW7_2
0.6111
p.S1013N
WSU-NHL
haematopoietic_and_lymphoid_tissue
COSMIC
VICTPTEE
DEG_SCF_FBW7_2
0.75
Drug responses associated with KNL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VICTPTEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NG31
Kinetochore scaffold 1
DEG_SCF_FBW7_2
1014:1021
VICTPTEE
FBXW7
0.9775
More...