DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VIPFDD
Uniprot ID:
Q96RE9
Source protein:
Zinc finger protein 300
Source gene:
ZNF300
Class:
LIG_APCC_ABBA_1
Location:
238:243
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.994
ASA_SCORE:
62.2
COIL:
0.8467
CONS_SCORE:
0.4701
DSS_SCORE:
0.3691
HELIX:
0.048
FCONS_SCORE:
0.8609
RIG_SCORE:
0.782
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S231G
TCGA-38-4632
LUAD
TCGA
VIPFDD
LIG_APCC_ABBA_1
0.1389
p.S231G
DO23858
LUAD
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.1389
p.H251Y
TCGA-67-3771
LUAD
TCGA
VIPFDD
LIG_APCC_ABBA_1
0.1111
p.H251Y
DO25797
LUAD
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.1111
p.S239N
TCGA-A5-A0G2
UCEC
TCGA
VIPFDD
LIG_APCC_ABBA_1
0.7069
p.S239N
DO41235
UCEC
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.7069
p.E248Q
TCGA-CR-6484
HNSC
TCGA
VIPFDD
LIG_APCC_ABBA_1
0.1944
p.P228H
TCGA-DU-6392
LGG
TCGA
VIPFDD
LIG_APCC_ABBA_1
0.0556
p.P228H
DO22237
LGG
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.0556
p.P228H
DO229032
LICA
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.0556
p.D229N
TCGA-FR-A726
SKCM
TCGA
VIPFDD
LIG_APCC_ABBA_1
0.0833
p.D229N
DO48665
SKCM
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.0833
p.G253V
TCGA-IB-7651
PAAD
TCGA
VIPFDD
LIG_APCC_ABBA_1
0.0556
p.G253V
DO46657
PAAD
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.0556
p.Q230P
TCGA-V5-A7RC
ESCA
TCGA
VIPFDD
LIG_APCC_ABBA_1
0.1111
p.V249I
DO223011
ESCA
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.1667
p.V249I
DO40804
UCEC
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.1667
p.V249I
DO41614
UCEC
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.1667
p.P243L
DO23440
LINC
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.7582
p.N248H
DO43306
UCEC
ICGC
VIPFDD
LIG_APCC_ABBA_1
0.1944
p.G233R
SIDM00338
Acute Myeloid Leukemia
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.3056
p.G233R
SIDM00581
Glioblastoma
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.3056
p.G233R
SIDM00560
Gastric Carcinoma
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.3056
p.G233R
SIDM00543
Melanoma
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.3056
p.G233R
SIDM00243
Other Solid Cancers
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.3056
p.G233R
SIDM01728
Endometrial Carcinoma
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.3056
p.G233R
SIDM01761
Rhabdomyosarcoma
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.3056
p.P228S
SIDM00990
Non-Small Cell Lung Carcinoma
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.0556
p.P228S
BEN
lung
COSMIC
VIPFDD
LIG_APCC_ABBA_1
0.0556
p.E242A
SIDM00014
Colorectal Carcinoma
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.7701
p.E242A
LIM1215
large_intestine
COSMIC
VIPFDD
LIG_APCC_ABBA_1
0.7701
p.G234D
SIDM00849
Kidney Carcinoma
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.2222
p.G234D
A704
kidney
COSMIC
VIPFDD
LIG_APCC_ABBA_1
0.2222
p.S241R
SIDM01564
Colorectal Carcinoma
GDSC
VIPFDD
LIG_APCC_ABBA_1
0.7427
p.G237V
ACH-001566
Skin Cancer
CCLE
VIPFDD
LIG_APCC_ABBA_1
0.3056
p.C238R
OSC-19
upper_aerodigestive_tract
COSMIC
VIPFDD
LIG_APCC_ABBA_1
0.8301
p.P240L
CP66-MEL
skin
COSMIC
VIPFDD
LIG_APCC_ABBA_1
0.6471
Drug responses associated with ZNF300 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VIPFDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RE9
Zinc finger protein 300
LIG_APCC_ABBA_1
238:243
VIPFDD
APC,CDC20,FZR1
0.994
More...