DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKENL
Uniprot ID:
Q7Z417
Source protein:
Nuclear fragile X mental retardation-interacting protein 2
Source gene:
NUFIP2
Class:
DEG_APCC_KENBOX_2
Location:
362:366
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9985
ASA_SCORE:
97.22
COIL:
0.7614
CONS_SCORE:
0.9502
DSS_SCORE:
0.392
HELIX:
0.2022
FCONS_SCORE:
1.422
RIG_SCORE:
0.7624
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V353L
TCGA-50-5049
LUAD
TCGA
VKENL
DEG_APCC_KENBOX_2
0.0833
p.V353L
DO23705
LUAD
ICGC
VKENL
DEG_APCC_KENBOX_2
0.0833
p.S373F
TCGA-CV-A45U
HNSC
TCGA
VKENL
DEG_APCC_KENBOX_2
0.1389
p.S373F
DO52057
HNSC
ICGC
VKENL
DEG_APCC_KENBOX_2
0.1389
p.S360N
TCGA-EB-A3Y6
SKCM
TCGA
VKENL
DEG_APCC_KENBOX_2
0.2778
p.S360N
DO38081
SKCM
ICGC
VKENL
DEG_APCC_KENBOX_2
0.2778
p.P354L
TCGA-EE-A3AA
SKCM
TCGA
VKENL
DEG_APCC_KENBOX_2
0.1111
p.P354L
DO222632
MELA
ICGC
VKENL
DEG_APCC_KENBOX_2
0.1111
p.P354L
DO37571
SKCM
ICGC
VKENL
DEG_APCC_KENBOX_2
0.1111
p.S374Y
TCGA-EO-A3B0
UCEC
TCGA
VKENL
DEG_APCC_KENBOX_2
0.5556
p.S374Y
DO219773
UCEC
ICGC
VKENL
DEG_APCC_KENBOX_2
0.5556
p.N372T
TCGA-EY-A1GD
UCEC
TCGA
VKENL
DEG_APCC_KENBOX_2
0.1667
p.N372T
DO42129
UCEC
ICGC
VKENL
DEG_APCC_KENBOX_2
0.1667
p.S360R
DO229026
LICA
ICGC
VKENL
DEG_APCC_KENBOX_2
0.2778
p.Y358D
DO222875
MELA
ICGC
VKENL
DEG_APCC_KENBOX_2
0.2222
p.I370V
SIDM00845
Burkitt's Lymphoma
GDSC
VKENL
DEG_APCC_KENBOX_2
0.2222
p.I370V
SIDM00461
Acute Myeloid Leukemia
GDSC
VKENL
DEG_APCC_KENBOX_2
0.2222
p.I370V
SIDM01519
Head and Neck Carcinoma
GDSC
VKENL
DEG_APCC_KENBOX_2
0.2222
p.I370V
ACH-000786
Lymphoma
CCLE
VKENL
DEG_APCC_KENBOX_2
0.2222
p.V353A
SIDM00480
Ovarian Carcinoma
GDSC
VKENL
DEG_APCC_KENBOX_2
0.0833
p.V353A
ACH-000704
Ovarian Cancer
CCLE
VKENL
DEG_APCC_KENBOX_2
0.0833
p.V353A
OAW-42
ovary
COSMIC
VKENL
DEG_APCC_KENBOX_2
0.0833
p.N372S
SIDM01397
Melanoma
GDSC
VKENL
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with NUFIP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z417
Nuclear fragile X mental retardation-interacting protein 2
DEG_APCC_KENBOX_2
362:366
VKENL
APC,CDC20,FZR1
0.9985
More...