DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VKLHNE
Uniprot ID:
Q5JTH9
Source protein:
RRP12-like protein
Source gene:
RRP12
Class:
LIG_APCC_ABBA_1
Location:
56:61
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9682
ASA_SCORE:
62.5333
COIL:
0.0303
CONS_SCORE:
0.2756
DSS_SCORE:
0.4271
HELIX:
0.9702
FCONS_SCORE:
1.2577
RIG_SCORE:
0.746
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K57Q
TCGA-2W-A8YY
CESC
TCGA
VKLHNE
LIG_APCC_ABBA_1
0.5833
p.K57Q
DO223732
CESC
ICGC
VKLHNE
LIG_APCC_ABBA_1
0.5833
p.S66F
TCGA-DK-AA75
BLCA
TCGA
VKLHNE
LIG_APCC_ABBA_1
0.6389
p.S66F
DO219012
BLCA
ICGC
VKLHNE
LIG_APCC_ABBA_1
0.6389
p.G65W
TCGA-EE-A29L
SKCM
TCGA
VKLHNE
LIG_APCC_ABBA_1
0.2222
p.G65W
DO37835
SKCM
ICGC
VKLHNE
LIG_APCC_ABBA_1
0.2222
p.R68S
DO229045
LICA
ICGC
VKLHNE
LIG_APCC_ABBA_1
0.1389
p.A55D
DO229009
LICA
ICGC
VKLHNE
LIG_APCC_ABBA_1
0.3056
p.P56S
DO48726
SKCM
ICGC
VKLHNE
LIG_APCC_ABBA_1
0.6752
Drug responses associated with RRP12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKLHNE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JTH9
RRP12-like protein
LIG_APCC_ABBA_1
56:61
VKLHNE
APC,CDC20,FZR1
0.9682
More...