DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKPTPGLT
Uniprot ID:
Q53HL2
Source protein:
Borealin
Source gene:
CDCA8
Class:
DEG_SCF_FBW7_1
Location:
182:189
E3 ligase:
FBXW7
DEGRON score:
0.9996
ASA_SCORE:
75.35
COIL:
0.9406
CONS_SCORE:
0.7523
DSS_SCORE:
0.4793
HELIX:
0.0165
FCONS_SCORE:
1.0314
RIG_SCORE:
0.7012
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G187C
TCGA-A5-A0G1
UCEC
TCGA
VKPTPGLT
DEG_SCF_FBW7_1
0.6489
p.G187C
DO42472
UCEC
ICGC
VKPTPGLT
DEG_SCF_FBW7_1
0.6489
p.R191M
DO228971
LICA
ICGC
VKPTPGLT
DEG_SCF_FBW7_1
0.2778
p.E178D
NCI-H128
lung
COSMIC
VKPTPGLT
DEG_SCF_FBW7_1
0.2222
p.R176Q
TCGA-AP-A0LF
UCEC
TCGA
VKPTPGLT
DEG_SCF_FBW7_1
0.1667
p.R176Q
DO43610
UCEC
ICGC
VKPTPGLT
DEG_SCF_FBW7_1
0.1667
p.R176L
DO229009
LICA
ICGC
VKPTPGLT
DEG_SCF_FBW7_1
0.1667
p.R195S
SIDM00569
Osteosarcoma
GDSC
VKPTPGLT
DEG_SCF_FBW7_1
0.1667
p.R195S
NY
bone
COSMIC
VKPTPGLT
DEG_SCF_FBW7_1
0.1667
p.V174M
SIDM00095
Glioblastoma
GDSC
VKPTPGLT
DEG_SCF_FBW7_1
0.1111
p.V174M
ACH-000504
Brain Cancer
CCLE
VKPTPGLT
DEG_SCF_FBW7_1
0.1111
p.V174M
SNB75
central_nervous_system
COSMIC
VKPTPGLT
DEG_SCF_FBW7_1
0.1111
p.A173V
TCGA-IB-7651
PAAD
TCGA
VKPTPGLT
DEG_SCF_FBW7_1
0.0833
p.A173V
DO46657
PAAD
ICGC
VKPTPGLT
DEG_SCF_FBW7_1
0.0833
p.P172L
SIDM00384
B-Cell Non-Hodgkin's Lymphoma
GDSC
VKPTPGLT
DEG_SCF_FBW7_1
0.0556
p.P172L
ACH-001642
Lymphoma
CCLE
VKPTPGLT
DEG_SCF_FBW7_1
0.0556
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Drug responses associated with CDCA8 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VKPTPGLT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53HL2
Borealin
DEG_SCF_FBW7_1
182:189
VKPTPGLT
FBXW7
0.9996
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