DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKPYED
Uniprot ID:
O15484
Source protein:
Calpain-5
Source gene:
CAPN5
Class:
LIG_APCC_ABBA_1
Location:
5:10
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7924
ASA_SCORE:
91.0167
COIL:
0.8893
CONS_SCORE:
0.3787
DSS_SCORE:
0.3689
HELIX:
0.0925
FCONS_SCORE:
0.9862
RIG_SCORE:
0.802
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R18W
TCGA-AH-6644
READ
TCGA
VKPYED
LIG_APCC_ABBA_1
0.1111
p.R18W
DO37237
READ
ICGC
VKPYED
LIG_APCC_ABBA_1
0.1111
p.R18W
SIDM00493
Other Solid Cancers
GDSC
VKPYED
LIG_APCC_ABBA_1
0.1111
p.S14L
TCGA-FD-A3SO
BLCA
TCGA
VKPYED
LIG_APCC_ABBA_1
0.6667
p.S14L
DO569
BLCA
ICGC
VKPYED
LIG_APCC_ABBA_1
0.6667
p.R18Q
SIDM00377
Other Sarcomas
GDSC
VKPYED
LIG_APCC_ABBA_1
0.1111
Drug responses associated with CAPN5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKPYED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15484
Calpain-5
LIG_APCC_ABBA_1
5:10
VKPYED
APC,CDC20,FZR1
0.7924
More...