DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKTPMKS
Uniprot ID:
Q6VY07
Source protein:
Phosphofurin acidic cluster sorting protein 1
Source gene:
PACS1
Class:
DEG_SCF_FBW7_1
Location:
479:485
E3 ligase:
FBXW7
DEGRON score:
0.978
ASA_SCORE:
96.0429
COIL:
0.8991
CONS_SCORE:
0.4074
DSS_SCORE:
0.586
HELIX:
0.0731
FCONS_SCORE:
1.1009
RIG_SCORE:
0.6976
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L473V
TCGA-DK-A3X1
BLCA
TCGA
VKTPMKS
DEG_SCF_FBW7_1
0.1667
p.P482S
TCGA-W3-A824
SKCM
TCGA
VKTPMKS
DEG_SCF_FBW7_1
0.6752
p.F474L
DO8264
COAD
ICGC
VKTPMKS
DEG_SCF_FBW7_1
0.1944
p.F474L
DO43041
UCEC
ICGC
VKTPMKS
DEG_SCF_FBW7_1
0.1944
p.T483I
DO41044
UCEC
ICGC
VKTPMKS
DEG_SCF_FBW7_1
0.7078
p.S494G
DO223282
UCEC
ICGC
VKTPMKS
DEG_SCF_FBW7_1
0.0833
p.V490M
DO41999
UCEC
ICGC
VKTPMKS
DEG_SCF_FBW7_1
0.1944
p.H487Y
DO42472
UCEC
ICGC
VKTPMKS
DEG_SCF_FBW7_1
0.2778
p.S495F
SIDM01175
Other Sarcomas
GDSC
VKTPMKS
DEG_SCF_FBW7_1
0.5
p.S495F
ACH-002309
Sarcoma
CCLE
VKTPMKS
DEG_SCF_FBW7_1
0.5
p.S495F
SW684
soft_tissue
COSMIC
VKTPMKS
DEG_SCF_FBW7_1
0.5
p.V474I
SIDM00239
Kidney Carcinoma
GDSC
VKTPMKS
DEG_SCF_FBW7_1
0.1944
p.V474I
SIDM01691
Chronic Myelogenous Leukemia
GDSC
VKTPMKS
DEG_SCF_FBW7_1
0.1944
p.V474I
ACH-000159
Kidney Cancer
CCLE
VKTPMKS
DEG_SCF_FBW7_1
0.1944
p.V474I
ACH-000321
Leukemia
CCLE
VKTPMKS
DEG_SCF_FBW7_1
0.1944
p.V474I
OS-RC-2
kidney
COSMIC
VKTPMKS
DEG_SCF_FBW7_1
0.1944
p.A469V
SIDM00537
Colorectal Carcinoma
GDSC
VKTPMKS
DEG_SCF_FBW7_1
0.0556
p.A469V
ACH-000982
Colon/Colorectal Cancer
CCLE
VKTPMKS
DEG_SCF_FBW7_1
0.0556
p.A469V
ACH-001345
Colon/Colorectal Cancer
CCLE
VKTPMKS
DEG_SCF_FBW7_1
0.0556
p.A469V
GP5d
large_intestine
COSMIC
VKTPMKS
DEG_SCF_FBW7_1
0.0556
p.M483V
SIDM00217
Colorectal Carcinoma
GDSC
VKTPMKS
DEG_SCF_FBW7_1
0.6097
p.M483V
ACH-000999
Colon/Colorectal Cancer
CCLE
VKTPMKS
DEG_SCF_FBW7_1
0.6097
p.M483V
SNU-1040
large_intestine
COSMIC
VKTPMKS
DEG_SCF_FBW7_1
0.6097
p.K486R
SNU-407
large_intestine
COSMIC
VKTPMKS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with PACS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKTPMKS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6VY07
Phosphofurin acidic cluster sorting protein 1
DEG_SCF_FBW7_1
479:485
VKTPMKS
FBXW7
0.978
More...