DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKTPPIE
Uniprot ID:
Q6ZRR7
Source protein:
Leucine-rich repeat-containing protein 9
Source gene:
LRRC9
Class:
DEG_SCF_FBW7_2
Location:
1394:1400
E3 ligase:
FBXW7
DEGRON score:
0.5974
ASA_SCORE:
57.8
COIL:
0.5867
CONS_SCORE:
0.2621
DSS_SCORE:
0.3611
HELIX:
0.0184
FCONS_SCORE:
1.1036
RIG_SCORE:
0.7652
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F1391V
TCGA-E6-A1M0
UCEC
TCGA
VKTPPIE
DEG_SCF_FBW7_2
0.25
p.F1391V
DO43682
UCEC
ICGC
VKTPPIE
DEG_SCF_FBW7_2
0.25
p.E1400K
DO229346
LAML
ICGC
VKTPPIE
DEG_SCF_FBW7_2
0.7022
p.E1400K
DO229480
LAML
ICGC
VKTPPIE
DEG_SCF_FBW7_2
0.7022
p.G1392V
DO229019
LICA
ICGC
VKTPPIE
DEG_SCF_FBW7_2
0.2778
Drug responses associated with LRRC9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKTPPIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZRR7
Leucine-rich repeat-containing protein 9
DEG_SCF_FBW7_2
1394:1400
VKTPPIE
FBXW7
0.5974
More...