DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKVFSE
Uniprot ID:
Q13322
Source protein:
Growth factor receptor-bound protein 10
Source gene:
GRB10
Class:
LIG_APCC_ABBA_1
Location:
170:175
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.934
ASA_SCORE:
61.3333
COIL:
0.3495
CONS_SCORE:
0.5789
DSS_SCORE:
0.3851
HELIX:
0.0042
FCONS_SCORE:
1.3851
RIG_SCORE:
0.7709
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G177E
TCGA-44-7659
LUAD
TCGA
VKVFSE
LIG_APCC_ABBA_1
0.2778
p.A165T
TCGA-G4-6303
COAD
TCGA
VKVFSE
LIG_APCC_ABBA_1
0.1944
p.P161A
TCGA-GV-A3JZ
BLCA
TCGA
VKVFSE
LIG_APCC_ABBA_1
0.0833
p.V170G
TCGA-IB-7651
PAAD
TCGA
VKVFSE
LIG_APCC_ABBA_1
0.7532
p.A166T
TCGA-L5-A43J
ESCA
TCGA
VKVFSE
LIG_APCC_ABBA_1
0.2222
p.A166T
ACH-000874
Leukemia
CCLE
VKVFSE
LIG_APCC_ABBA_1
0.2222
p.A166T
ACH-000989
Colon/Colorectal Cancer
CCLE
VKVFSE
LIG_APCC_ABBA_1
0.2222
p.A166T
SNU-175
large_intestine
COSMIC
VKVFSE
LIG_APCC_ABBA_1
0.2222
p.A166T
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
VKVFSE
LIG_APCC_ABBA_1
0.2222
p.T178I
DO43891
UCEC
ICGC
VKVFSE
LIG_APCC_ABBA_1
0.25
p.P160T
ACH-000475
Liver Cancer
CCLE
VKVFSE
LIG_APCC_ABBA_1
0.0556
p.P160T
huH-1
liver
COSMIC
VKVFSE
LIG_APCC_ABBA_1
0.0556
p.A160T
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
VKVFSE
LIG_APCC_ABBA_1
0.0556
p.A160T
SNU-175
large_intestine
COSMIC
VKVFSE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with GRB10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKVFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13322
Growth factor receptor-bound protein 10
LIG_APCC_ABBA_1
170:175
VKVFSE
APC,CDC20,FZR1
0.934
More...