DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKVYSE
Uniprot ID:
Q14451
Source protein:
Growth factor receptor-bound protein 7
Source gene:
GRB7
Class:
LIG_APCC_ABBA_1
Location:
104:109
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6488
ASA_SCORE:
35.2167
COIL:
0.2068
CONS_SCORE:
0.4431
DSS_SCORE:
0.3519
HELIX:
0.0033
FCONS_SCORE:
1.0991
RIG_SCORE:
0.7857
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P105S
TCGA-55-7994
LUAD
TCGA
VKVYSE
LIG_APCC_ABBA_1
0.6752
p.P105S
DO45311
LUAD
ICGC
VKVYSE
LIG_APCC_ABBA_1
0.6752
p.P118T
TCGA-90-A4ED
LUSC
TCGA
VKVYSE
LIG_APCC_ABBA_1
0.0833
p.P118T
DO45482
LUSC
ICGC
VKVYSE
LIG_APCC_ABBA_1
0.0833
p.P118L
TCGA-90-A4ED
LUSC
TCGA
VKVYSE
LIG_APCC_ABBA_1
0.0833
p.P118L
DO45482
LUSC
ICGC
VKVYSE
LIG_APCC_ABBA_1
0.0833
p.L117F
TCGA-EE-A2M5
SKCM
TCGA
VKVYSE
LIG_APCC_ABBA_1
0.1111
p.L117F
DO37425
SKCM
ICGC
VKVYSE
LIG_APCC_ABBA_1
0.1111
p.S99R
TCGA-EJ-5511
PRAD
TCGA
VKVYSE
LIG_APCC_ABBA_1
0.1944
p.S99R
DO36324
PRAD
ICGC
VKVYSE
LIG_APCC_ABBA_1
0.1944
p.E96K
TCGA-FW-A3R5
SKCM
TCGA
VKVYSE
LIG_APCC_ABBA_1
0.1111
p.E96K
DO37406
SKCM
ICGC
VKVYSE
LIG_APCC_ABBA_1
0.1111
p.I106N
TCGA-L5-A8NS
ESCA
TCGA
VKVYSE
LIG_APCC_ABBA_1
0.728
p.I106N
DO46973
RECA
ICGC
VKVYSE
LIG_APCC_ABBA_1
0.728
p.S112R
TCGA-L5-A8NS
ESCA
TCGA
VKVYSE
LIG_APCC_ABBA_1
0.25
p.S99C
DO228194
LICA
ICGC
VKVYSE
LIG_APCC_ABBA_1
0.1944
p.G108E
DO220851
MELA
ICGC
VKVYSE
LIG_APCC_ABBA_1
0.7199
p.G115E
SIDM00423
B-Cell Non-Hodgkin's Lymphoma
GDSC
VKVYSE
LIG_APCC_ABBA_1
0.1667
p.G115E
SU-DHL-8
NS
COSMIC
VKVYSE
LIG_APCC_ABBA_1
0.1667
p.G108R
SIDM00142
Endometrial Carcinoma
GDSC
VKVYSE
LIG_APCC_ABBA_1
0.7568
p.G108R
SIDM01187
Breast Carcinoma
GDSC
VKVYSE
LIG_APCC_ABBA_1
0.7568
p.G108R
SIDM01086
B-Lymphoblastic Leukemia
GDSC
VKVYSE
LIG_APCC_ABBA_1
0.7568
p.P100H
SIDM00429
B-Lymphoblastic Leukemia
GDSC
VKVYSE
LIG_APCC_ABBA_1
0.2222
p.P100H
NALM-6
haematopoietic_and_lymphoid_tissue
COSMIC
VKVYSE
LIG_APCC_ABBA_1
0.2222
p.E109D
ACH-000579
Skin Cancer
CCLE
VKVYSE
LIG_APCC_ABBA_1
0.5647
p.E109D
UACC-257
skin
COSMIC
VKVYSE
LIG_APCC_ABBA_1
0.5647
Drug responses associated with GRB7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKVYSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14451
Growth factor receptor-bound protein 7
LIG_APCC_ABBA_1
104:109
VKVYSE
APC,CDC20,FZR1
0.6488
More...