DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLIFLD
Uniprot ID:
Q14623
Source protein:
Indian hedgehog protein
Source gene:
IHH
Class:
LIG_APCC_ABBA_1
Location:
243:248
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5363
ASA_SCORE:
24.65
COIL:
0.1732
CONS_SCORE:
0.6502
DSS_SCORE:
0.2802
HELIX:
0.0313
FCONS_SCORE:
1.3295
RIG_SCORE:
0.8654
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F240L
TCGA-55-8507
LUAD
TCGA
VLIFLD
LIG_APCC_ABBA_1
0.25
p.F240L
DO45412
LUAD
ICGC
VLIFLD
LIG_APCC_ABBA_1
0.25
p.F246L
TCGA-CK-4951
COAD
TCGA
VLIFLD
LIG_APCC_ABBA_1
0.6981
p.F246L
DO10582
COAD
ICGC
VLIFLD
LIG_APCC_ABBA_1
0.6981
p.R249H
TCGA-HJ-7597
STAD
TCGA
VLIFLD
LIG_APCC_ABBA_1
0.3056
p.R249H
DO38195
STAD
ICGC
VLIFLD
LIG_APCC_ABBA_1
0.3056
p.A256P
DO228390
LICA
ICGC
VLIFLD
LIG_APCC_ABBA_1
0.1111
p.P251H
DO228948
LICA
ICGC
VLIFLD
LIG_APCC_ABBA_1
0.25
p.R249S
DO229019
LICA
ICGC
VLIFLD
LIG_APCC_ABBA_1
0.3056
p.Q258K
DO229032
LICA
ICGC
VLIFLD
LIG_APCC_ABBA_1
0.0556
p.G236V
DO34905
PACA
ICGC
VLIFLD
LIG_APCC_ABBA_1
0.1389
p.P251L
SIDM01051
Ovarian Carcinoma
GDSC
VLIFLD
LIG_APCC_ABBA_1
0.25
p.P251L
ACH-000936
Ovarian Cancer
CCLE
VLIFLD
LIG_APCC_ABBA_1
0.25
p.P251L
EFO-27
ovary
COSMIC
VLIFLD
LIG_APCC_ABBA_1
0.25
Drug responses associated with IHH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLIFLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14623
Indian hedgehog protein
LIG_APCC_ABBA_1
243:248
VLIFLD
APC,CDC20,FZR1
0.5363
More...