DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLKTPTSS
Uniprot ID:
Q14684
Source protein:
Ribosomal RNA processing protein 1 homolog B
Source gene:
RRP1B
Class:
DEG_SCF_FBW7_1
Location:
725:732
E3 ligase:
FBXW7
DEGRON score:
0.9986
ASA_SCORE:
76.0625
COIL:
0.8993
CONS_SCORE:
0.4818
DSS_SCORE:
0.6401
HELIX:
0.0265
FCONS_SCORE:
1.0263
RIG_SCORE:
0.624
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E718K
DO48390
BLCA
ICGC
VLKTPTSS
DEG_SCF_FBW7_1
0.1389
p.A740S
DO229029
LICA
ICGC
VLKTPTSS
DEG_SCF_FBW7_1
0.1111
p.K720N
DO229037
LICA
ICGC
VLKTPTSS
DEG_SCF_FBW7_1
0.3056
p.G724E
SIDM01096
Colorectal Carcinoma
GDSC
VLKTPTSS
DEG_SCF_FBW7_1
0.3056
p.G724E
ACH-000400
Colon/Colorectal Cancer
CCLE
VLKTPTSS
DEG_SCF_FBW7_1
0.3056
p.G724E
SK-CO-1
large_intestine
COSMIC
VLKTPTSS
DEG_SCF_FBW7_1
0.3056
p.G724W
SIDM00661
B-Cell Non-Hodgkin's Lymphoma
GDSC
VLKTPTSS
DEG_SCF_FBW7_1
0.3056
p.G724W
ACH-000914
Lymphoma
CCLE
VLKTPTSS
DEG_SCF_FBW7_1
0.3056
p.G724W
HT
haematopoietic_and_lymphoid_tissue
COSMIC
VLKTPTSS
DEG_SCF_FBW7_1
0.3056
p.L726M
SIDM00562
Breast Carcinoma
GDSC
VLKTPTSS
DEG_SCF_FBW7_1
0.5999
p.L726M
ACH-002163
Breast Cancer
CCLE
VLKTPTSS
DEG_SCF_FBW7_1
0.5999
p.L726M
MRK-nu-1
breast
COSMIC
VLKTPTSS
DEG_SCF_FBW7_1
0.5999
Drug responses associated with RRP1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLKTPTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14684
Ribosomal RNA processing protein 1 homolog B
DEG_SCF_FBW7_1
725:732
VLKTPTSS
FBXW7
0.9986
More...