DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLLFTD
Uniprot ID:
Q96S38
Source protein:
Ribosomal protein S6 kinase delta-1
Source gene:
RPS6KC1
Class:
LIG_APCC_ABBA_1
Location:
843:848
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8284
ASA_SCORE:
76.3
COIL:
0.3055
CONS_SCORE:
0.3406
DSS_SCORE:
0.411
HELIX:
0.6477
FCONS_SCORE:
1.0644
RIG_SCORE:
0.868
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D852N
TCGA-50-5935
LUAD
TCGA
VLLFTD
LIG_APCC_ABBA_1
0.2222
p.D836N
TCGA-A5-A1OF
UCEC
TCGA
VLLFTD
LIG_APCC_ABBA_1
0.1389
p.D851N
TCGA-DK-A1A3
BLCA
TCGA
VLLFTD
LIG_APCC_ABBA_1
0.25
p.D848Y
DO230529
LUSC
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.7325
p.W849C
DO219193
LUSC
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.3056
p.P842L
DO222423
MELA
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.3056
p.P842L
DO222546
MELA
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.3056
p.P842L
DO37425
SKCM
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.3056
p.H841Q
DO51288
SKCM
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.2778
p.M853I
DO51281
SKCM
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.1944
p.R854K
DO40884
UCEC
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.1667
p.D837Y
DO41758
UCEC
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.1667
p.D837Y
DO41572
UCEC
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.1667
p.A850T
DO41235
UCEC
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.2778
p.S840Y
DO42793
UCEC
ICGC
VLLFTD
LIG_APCC_ABBA_1
0.25
p.Q837H
ACH-000829
Myeloma
CCLE
VLLFTD
LIG_APCC_ABBA_1
0.1667
p.E841K
HCC2218
breast
COSMIC
VLLFTD
LIG_APCC_ABBA_1
0.2778
p.R844H
HCT-116
large_intestine
COSMIC
VLLFTD
LIG_APCC_ABBA_1
0.8244
Drug responses associated with RPS6KC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLLFTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96S38
Ribosomal protein S6 kinase delta-1
LIG_APCC_ABBA_1
843:848
VLLFTD
APC,CDC20,FZR1
0.8284
More...