DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLLFWE
Uniprot ID:
Q5GAN4
Source protein:
Probable inactive ribonuclease-like protein 12
Source gene:
RNASE12
Class:
LIG_APCC_ABBA_1
Location:
10:15
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9455
ASA_SCORE:
107.8167
COIL:
0.6593
CONS_SCORE:
0.5622
DSS_SCORE:
0.0004
HELIX:
0.2005
FCONS_SCORE:
1.3676
RIG_SCORE:
1.0284
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I7V
TCGA-05-4395
LUAD
TCGA
VLLFWE
LIG_APCC_ABBA_1
0.25
p.I7V
DO25444
LUAD
ICGC
VLLFWE
LIG_APCC_ABBA_1
0.25
p.V10L
TCGA-55-8511
LUAD
TCGA
VLLFWE
LIG_APCC_ABBA_1
0.5654
p.V10L
DO24940
LUAD
ICGC
VLLFWE
LIG_APCC_ABBA_1
0.5654
p.E15K
TCGA-BK-A6W3
UCEC
TCGA
VLLFWE
LIG_APCC_ABBA_1
0.7022
p.E15K
DO50076
UCEC
ICGC
VLLFWE
LIG_APCC_ABBA_1
0.7022
p.D20N
TCGA-F5-6814
READ
TCGA
VLLFWE
LIG_APCC_ABBA_1
0.1944
p.D20N
DO36556
READ
ICGC
VLLFWE
LIG_APCC_ABBA_1
0.1944
p.L12P
SIDM00749
Non-Small Cell Lung Carcinoma
GDSC
VLLFWE
LIG_APCC_ABBA_1
0.6471
p.L12P
ACH-000916
Lung Cancer
CCLE
VLLFWE
LIG_APCC_ABBA_1
0.6471
p.L12P
NCI-H1573
lung
COSMIC
VLLFWE
LIG_APCC_ABBA_1
0.6471
p.L9F
ACH-001794
Liposarcoma
CCLE
VLLFWE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with RNASE12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLLFWE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5GAN4
Probable inactive ribonuclease-like protein 12
LIG_APCC_ABBA_1
10:15
VLLFWE
APC,CDC20,FZR1
0.9455
More...