DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VLMFPE
Uniprot ID:
Q8IY92
Source protein:
Structure-specific endonuclease subunit SLX4
Source gene:
SLX4
Class:
LIG_APCC_ABBA_1
Location:
1114:1119
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8271
ASA_SCORE:
91.1833
COIL:
0.8467
CONS_SCORE:
0.3483
DSS_SCORE:
0.5199
HELIX:
0.0377
FCONS_SCORE:
1.0052
RIG_SCORE:
0.7305
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1106M
TCGA-AX-A1CE
UCEC
TCGA
VLMFPE
LIG_APCC_ABBA_1
0.1111
p.V1106M
DO227802
COCA
ICGC
VLMFPE
LIG_APCC_ABBA_1
0.1111
p.V1106M
DO42280
UCEC
ICGC
VLMFPE
LIG_APCC_ABBA_1
0.1111
p.K1120Q
TCGA-D9-A6EC
SKCM
TCGA
VLMFPE
LIG_APCC_ABBA_1
0.75
p.K1120Q
DO50291
SKCM
ICGC
VLMFPE
LIG_APCC_ABBA_1
0.75
p.M1116V
DO230326
COCA
ICGC
VLMFPE
LIG_APCC_ABBA_1
0.6097
p.P1122L
DO229003
COCA
ICGC
VLMFPE
LIG_APCC_ABBA_1
0.25
p.P1122L
DO229505
LAML
ICGC
VLMFPE
LIG_APCC_ABBA_1
0.25
p.Q1128L
DO231204
LUSC
ICGC
VLMFPE
LIG_APCC_ABBA_1
0.0833
p.P1122S
SIDM00545
Melanoma
GDSC
VLMFPE
LIG_APCC_ABBA_1
0.25
p.P1122S
ACH-000987
Skin Cancer
CCLE
VLMFPE
LIG_APCC_ABBA_1
0.25
p.P1122S
Mewo
skin
COSMIC
VLMFPE
LIG_APCC_ABBA_1
0.25
p.S1123P
SIDM00589
Oral Cavity Carcinoma
GDSC
VLMFPE
LIG_APCC_ABBA_1
0.6667
p.S1123P
SIDM00448
B-Cell Non-Hodgkin's Lymphoma
GDSC
VLMFPE
LIG_APCC_ABBA_1
0.6667
p.S1123P
SIDM00167
Head and Neck Carcinoma
GDSC
VLMFPE
LIG_APCC_ABBA_1
0.6667
p.S1123P
SIDM01611
Endometrial Carcinoma
GDSC
VLMFPE
LIG_APCC_ABBA_1
0.6667
p.S1123P
RC-K8
haematopoietic_and_lymphoid_tissue
COSMIC
VLMFPE
LIG_APCC_ABBA_1
0.6667
Drug responses associated with SLX4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLMFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IY92
Structure-specific endonuclease subunit SLX4
LIG_APCC_ABBA_1
1114:1119
VLMFPE
APC,CDC20,FZR1
0.8271
More...