DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VLPYPE
Uniprot ID:
Q9UPX0
Source protein:
Protein turtle homolog B
Source gene:
IGSF9B
Class:
LIG_APCC_ABBA_1
Location:
1146:1151
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9963
ASA_SCORE:
80.9833
COIL:
0.929
CONS_SCORE:
0.4105
DSS_SCORE:
0.6512
HELIX:
0.0063
FCONS_SCORE:
1.0704
RIG_SCORE:
0.6843
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1159S
TCGA-55-7907
LUAD
TCGA
VLPYPE
LIG_APCC_ABBA_1
0.1111
p.G1159S
DO25396
LUAD
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.1111
p.M1142V
TCGA-55-8089
LUAD
TCGA
VLPYPE
LIG_APCC_ABBA_1
0.2222
p.M1142V
DO23690
LUAD
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.2222
p.G1141V
TCGA-AJ-A3EK
UCEC
TCGA
VLPYPE
LIG_APCC_ABBA_1
0.1944
p.G1141V
DO41584
UCEC
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.1944
p.G1141V
SIDM01343
Gastric Carcinoma
GDSC
VLPYPE
LIG_APCC_ABBA_1
0.1944
p.G1141V
ACH-000764
Gastric Cancer
CCLE
VLPYPE
LIG_APCC_ABBA_1
0.1944
p.Q1140R
TCGA-BG-A222
UCEC
TCGA
VLPYPE
LIG_APCC_ABBA_1
0.1667
p.Q1140R
DO42977
UCEC
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.1667
p.E1151K
TCGA-CG-4460
STAD
TCGA
VLPYPE
LIG_APCC_ABBA_1
0.7022
p.E1151K
DO38427
STAD
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.7022
p.R1136Q
TCGA-CM-6165
COAD
TCGA
VLPYPE
LIG_APCC_ABBA_1
0.0556
p.R1136Q
DO9900
COAD
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.0556
p.P1150S
TCGA-FR-A8YC
SKCM
TCGA
VLPYPE
LIG_APCC_ABBA_1
0.5641
p.P1150S
DO50301
SKCM
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.5641
p.G1160S
TCGA-IB-7651
PAAD
TCGA
VLPYPE
LIG_APCC_ABBA_1
0.0833
p.G1160S
DO46657
PAAD
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.0833
p.G1156R
TCGA-IN-A7NU
STAD
TCGA
VLPYPE
LIG_APCC_ABBA_1
0.1944
p.G1156R
DO51746
STAD
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.1944
p.P1145H
DO224598
BRCA
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.3056
p.P1145H
DO1010
BRCA
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.3056
p.P1152L
DO49880
CESC
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.3056
p.P1152L
DO232761
PBCA
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.3056
p.H1158Q
DO7436
CLLE
ICGC
VLPYPE
LIG_APCC_ABBA_1
0.1389
p.P1155L
SIDM00933
Breast Carcinoma
GDSC
VLPYPE
LIG_APCC_ABBA_1
0.2222
p.P1155L
ACH-000856
Breast Cancer
CCLE
VLPYPE
LIG_APCC_ABBA_1
0.2222
p.P1155L
CAL-51
breast
COSMIC
VLPYPE
LIG_APCC_ABBA_1
0.2222
p.A1157E
SIDM01088
Endometrial Carcinoma
GDSC
VLPYPE
LIG_APCC_ABBA_1
0.1667
p.A1157E
ACH-000965
Endometrial/Uterine Cancer
CCLE
VLPYPE
LIG_APCC_ABBA_1
0.1667
p.A1157E
RL95-2
endometrium
COSMIC
VLPYPE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with IGSF9B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLPYPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPX0
Protein turtle homolog B
LIG_APCC_ABBA_1
1146:1151
VLPYPE
APC,CDC20,FZR1
0.9963
More...