DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLRTPSSE
Uniprot ID:
Q5HYW2
Source protein:
NHS-like protein 2
Source gene:
NHSL2
Class:
DEG_SCF_FBW7_2
Location:
344:351
E3 ligase:
FBXW7
DEGRON score:
0.997
ASA_SCORE:
91.875
COIL:
0.926
CONS_SCORE:
0.9839
DSS_SCORE:
0.7579
HELIX:
0.0276
FCONS_SCORE:
1.304
RIG_SCORE:
0.5875
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A358V
TCGA-CZ-5469
KIRC
TCGA
VLRTPSSE
DEG_SCF_FBW7_2
0.1389
p.A358V
DO16580
KIRC
ICGC
VLRTPSSE
DEG_SCF_FBW7_2
0.1389
p.S339G
TCGA-FA-A7Q1
DLBC
TCGA
VLRTPSSE
DEG_SCF_FBW7_2
0.1944
p.R336Q
DO233266
GACA
ICGC
VLRTPSSE
DEG_SCF_FBW7_2
0.1111
p.G358E
DO222653
MELA
ICGC
VLRTPSSE
DEG_SCF_FBW7_2
0.1389
p.S343I
DO36853
READ
ICGC
VLRTPSSE
DEG_SCF_FBW7_2
0.3056
p.P337H
DO42985
UCEC
ICGC
VLRTPSSE
DEG_SCF_FBW7_2
0.1389
p.P337S
DO41871
UCEC
ICGC
VLRTPSSE
DEG_SCF_FBW7_2
0.1389
p.D349N
DO42793
UCEC
ICGC
VLRTPSSE
DEG_SCF_FBW7_2
0.6932
p.R359W
SIDM00061
Ovarian Carcinoma
GDSC
VLRTPSSE
DEG_SCF_FBW7_2
0.1111
p.S342L
SIDM00922
Non-Small Cell Lung Carcinoma
GDSC
VLRTPSSE
DEG_SCF_FBW7_2
0.7222
p.L335Q
HT55
large_intestine
COSMIC
VLRTPSSE
DEG_SCF_FBW7_2
0.0833
p.V338L
NAMALWA
haematopoietic_and_lymphoid_tissue
COSMIC
VLRTPSSE
DEG_SCF_FBW7_2
0.1667
p.S334F
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
VLRTPSSE
DEG_SCF_FBW7_2
0.0556
Drug responses associated with NHSL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLRTPSSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5HYW2
NHS-like protein 2
DEG_SCF_FBW7_2
344:351
VLRTPSSE
FBXW7
0.997
More...