DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLTPENS
Uniprot ID:
Q5T481
Source protein:
RNA-binding protein 20
Source gene:
RBM20
Class:
DEG_SCF_FBW7_1
Location:
1102:1108
E3 ligase:
FBXW7
DEGRON score:
0.9443
ASA_SCORE:
93.8429
COIL:
0.7773
CONS_SCORE:
0.3966
DSS_SCORE:
0.4513
HELIX:
0.1676
FCONS_SCORE:
0.6959
RIG_SCORE:
0.741
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M1113I
TCGA-A2-A1FZ
BRCA
TCGA
VLTPENS
DEG_SCF_FBW7_1
0.1944
p.M1113I
DO2770
BRCA
ICGC
VLTPENS
DEG_SCF_FBW7_1
0.1944
p.S1115Y
TCGA-AN-A046
BRCA
TCGA
VLTPENS
DEG_SCF_FBW7_1
0.5833
p.S1115Y
DO1285
BRCA
ICGC
VLTPENS
DEG_SCF_FBW7_1
0.5833
p.S1115Y
DO8898
COAD
ICGC
VLTPENS
DEG_SCF_FBW7_1
0.5833
p.S1115Y
DO8730
COAD
ICGC
VLTPENS
DEG_SCF_FBW7_1
0.5833
p.E1101G
TCGA-D1-A16N
UCEC
TCGA
VLTPENS
DEG_SCF_FBW7_1
0.3056
p.E1101G
DO43771
UCEC
ICGC
VLTPENS
DEG_SCF_FBW7_1
0.3056
p.V1111M
SIDM00607
Glioblastoma
GDSC
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
SIDM00245
Small Cell Lung Carcinoma
GDSC
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
SIDM01027
Esophageal Squamous Cell Carcinoma
GDSC
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
SIDM00322
Esophageal Squamous Cell Carcinoma
GDSC
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
ACH-000261
Lung Cancer
CCLE
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
ACH-000561
Esophageal Cancer
CCLE
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
ACH-000622
Brain Cancer
CCLE
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
ACH-000865
Esophageal Cancer
CCLE
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
ACH-001036
Leukemia
CCLE
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
ACH-001207
Non-Cancerous
CCLE
VLTPENS
DEG_SCF_FBW7_1
0.25
p.V1111M
ACH-001656
Leukemia
CCLE
VLTPENS
DEG_SCF_FBW7_1
0.25
p.Y1110H
SIDM00783
Colorectal Carcinoma
GDSC
VLTPENS
DEG_SCF_FBW7_1
0.2778
p.Y1110H
ACH-000971
Colon/Colorectal Cancer
CCLE
VLTPENS
DEG_SCF_FBW7_1
0.2778
p.Y1110H
HCT-116
large_intestine
COSMIC
VLTPENS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with RBM20 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLTPENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T481
RNA-binding protein 20
DEG_SCF_FBW7_1
1102:1108
VLTPENS
FBXW7
0.9443
More...