DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLTPNRT
Uniprot ID:
Q8N9V3
Source protein:
WD repeat, SAM and U-box domain-containing protein 1
Source gene:
WDSUB1
Class:
DEG_SCF_FBW7_1
Location:
456:462
E3 ligase:
FBXW7
DEGRON score:
0.788
ASA_SCORE:
62.5857
COIL:
0.4767
CONS_SCORE:
0.6382
DSS_SCORE:
0.2955
HELIX:
0.3316
FCONS_SCORE:
1.0566
RIG_SCORE:
0.8038
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V456I
TCGA-B5-A3FC
UCEC
TCGA
VLTPNRT
DEG_SCF_FBW7_1
0.5965
p.V456I
DO41871
UCEC
ICGC
VLTPNRT
DEG_SCF_FBW7_1
0.5965
p.S454L
TCGA-CR-6481
HNSC
TCGA
VLTPNRT
DEG_SCF_FBW7_1
0.2778
p.S454L
DO14990
HNSC
ICGC
VLTPNRT
DEG_SCF_FBW7_1
0.2778
p.M465L
TCGA-GN-A4U3
SKCM
TCGA
VLTPNRT
DEG_SCF_FBW7_1
0.25
p.M465L
DO219484
SKCM
ICGC
VLTPNRT
DEG_SCF_FBW7_1
0.25
p.L450I
DO228948
LICA
ICGC
VLTPNRT
DEG_SCF_FBW7_1
0.1667
p.A466D
DO229019
LICA
ICGC
VLTPNRT
DEG_SCF_FBW7_1
0.2222
p.R461K
SIDM00655
Other Solid Cancers
GDSC
VLTPNRT
DEG_SCF_FBW7_1
0.6126
p.R461K
NCCIT
testis
COSMIC
VLTPNRT
DEG_SCF_FBW7_1
0.6126
Drug responses associated with WDSUB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLTPNRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N9V3
WD repeat, SAM and U-box domain-containing protein 1
DEG_SCF_FBW7_1
456:462
VLTPNRT
FBXW7
0.788
More...