DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLTPQLS
Uniprot ID:
O75298
Source protein:
Reticulon-2
Source gene:
RTN2
Class:
DEG_SCF_FBW7_1
Location:
202:208
E3 ligase:
FBXW7
DEGRON score:
0.9982
ASA_SCORE:
77.9143
COIL:
0.8791
CONS_SCORE:
0.4305
DSS_SCORE:
0.8262
HELIX:
0.0337
FCONS_SCORE:
1.1048
RIG_SCORE:
0.627
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A199D
DO229009
LICA
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.6944
p.P205S
TCGA-D3-A1QB
SKCM
TCGA
VLTPQLS
DEG_SCF_FBW7_1
0.6752
p.P205S
DO47573
SKCM
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.6752
p.S198P
DO229056
LICA
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.6667
p.Q206K
TCGA-D3-A8GI
SKCM
TCGA
VLTPQLS
DEG_SCF_FBW7_1
0.5833
p.Q206K
DO50284
SKCM
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.5833
p.E201K
TCGA-G4-6586
COAD
TCGA
VLTPQLS
DEG_SCF_FBW7_1
0.3056
p.E201K
DO9698
COAD
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.3056
p.P209L
SIDM00238
Ovarian Carcinoma
GDSC
VLTPQLS
DEG_SCF_FBW7_1
0.3056
p.P209L
ACH-000947
Ovarian Cancer
CCLE
VLTPQLS
DEG_SCF_FBW7_1
0.3056
p.P209L
OVK-18
ovary
COSMIC
VLTPQLS
DEG_SCF_FBW7_1
0.3056
p.G210C
TCGA-DS-A0VK
CESC
TCGA
VLTPQLS
DEG_SCF_FBW7_1
0.2778
p.G210C
DO6256
CESC
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.2778
p.G212W
TCGA-ER-A195
SKCM
TCGA
VLTPQLS
DEG_SCF_FBW7_1
0.2222
p.A196V
NCI-H2172
lung
COSMIC
VLTPQLS
DEG_SCF_FBW7_1
0.1667
p.T195N
DO219917
DLBC
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.1389
p.T195I
DO220885
MELA
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.1389
p.G217S
TCGA-BH-A0HF
BRCA
TCGA
VLTPQLS
DEG_SCF_FBW7_1
0.0833
p.G217S
DO1749
BRCA
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.0833
p.T218A
TCGA-B5-A5OC
UCEC
TCGA
VLTPQLS
DEG_SCF_FBW7_1
0.0556
p.T218A
DO52405
UCEC
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.0556
p.P218T
DO220562
KICH
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.0556
p.Y192H
DO44802
LICA
ICGC
VLTPQLS
DEG_SCF_FBW7_1
0.0556
Showing 1 to 23 of 23 entries
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Drug responses associated with RTN2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VLTPQLS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75298
Reticulon-2
DEG_SCF_FBW7_1
202:208
VLTPQLS
FBXW7
0.9982
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