DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLTPSME
Uniprot ID:
P29558
Source protein:
RNA-binding motif, single-stranded-interacting protein 1
Source gene:
RBMS1
Class:
DEG_SCF_FBW7_2
Location:
320:326
E3 ligase:
FBXW7
DEGRON score:
0.9776
ASA_SCORE:
80.7
COIL:
0.8529
CONS_SCORE:
0.5103
DSS_SCORE:
0.4455
HELIX:
0.0841
FCONS_SCORE:
1.1119
RIG_SCORE:
0.687
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I313M
TCGA-78-7633
LUAD
TCGA
VLTPSME
DEG_SCF_FBW7_2
0.1389
p.A334T
TCGA-AX-A1CE
UCEC
TCGA
VLTPSME
DEG_SCF_FBW7_2
0.1111
p.A334T
SIDM00428
Acute Myeloid Leukemia
GDSC
VLTPSME
DEG_SCF_FBW7_2
0.1111
p.A334T
ACH-000294
Leukemia
CCLE
VLTPSME
DEG_SCF_FBW7_2
0.1111
p.A334T
NB-4
haematopoietic_and_lymphoid_tissue
COSMIC
VLTPSME
DEG_SCF_FBW7_2
0.1111
p.G318C
TCGA-EE-A2MN
SKCM
TCGA
VLTPSME
DEG_SCF_FBW7_2
0.2778
p.L314I
TCGA-EO-A3B0
UCEC
TCGA
VLTPSME
DEG_SCF_FBW7_2
0.1667
p.I312M
DO2401
BRCA
ICGC
VLTPSME
DEG_SCF_FBW7_2
0.1111
p.Q321K
DO228976
LICA
ICGC
VLTPSME
DEG_SCF_FBW7_2
0.6944
p.A311D
DO229045
LICA
ICGC
VLTPSME
DEG_SCF_FBW7_2
0.0833
p.T335N
DO229060
LICA
ICGC
VLTPSME
DEG_SCF_FBW7_2
0.0833
p.I326M
DO24359
LUAD
ICGC
VLTPSME
DEG_SCF_FBW7_2
0.7618
p.S310C
DO26898
LUSC
ICGC
VLTPSME
DEG_SCF_FBW7_2
0.0556
p.P322S
DO51407
PRAD
ICGC
VLTPSME
DEG_SCF_FBW7_2
0.6752
p.G331C
DO37423
SKCM
ICGC
VLTPSME
DEG_SCF_FBW7_2
0.1944
p.L327I
DO219773
UCEC
ICGC
VLTPSME
DEG_SCF_FBW7_2
0.3056
p.S330P
SIDM00199
Chondrosarcoma
GDSC
VLTPSME
DEG_SCF_FBW7_2
0.2222
p.S330P
ACH-002099
Bone Cancer
CCLE
VLTPSME
DEG_SCF_FBW7_2
0.2222
p.S330P
CS1
bone
COSMIC
VLTPSME
DEG_SCF_FBW7_2
0.2222
p.A314T
NB-4
haematopoietic_and_lymphoid_tissue
COSMIC
VLTPSME
DEG_SCF_FBW7_2
0.1667
p.T323M
SNU-1040
large_intestine
COSMIC
VLTPSME
DEG_SCF_FBW7_2
0.7423
p.S325G
COR-L23
lung
COSMIC
VLTPSME
DEG_SCF_FBW7_2
0.6993
p.S310P
CS1
bone
COSMIC
VLTPSME
DEG_SCF_FBW7_2
0.0556
Drug responses associated with RBMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLTPSME
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P29558
RNA-binding motif, single-stranded-interacting protein 1
DEG_SCF_FBW7_2
320:326
VLTPSME
FBXW7
0.9776
More...