DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
VLTTPCLT
Uniprot ID:
Q13239
Source protein:
Src-like-adapter
Source gene:
SLA
Class:
DEG_SCF_FBW7_1
Location:
170:177
E3 ligase:
FBXW7
DEGRON score:
0.776
ASA_SCORE:
53.5375
COIL:
0.691
CONS_SCORE:
0.8681
DSS_SCORE:
0.0421
HELIX:
0.0375
FCONS_SCORE:
1.3058
RIG_SCORE:
0.8832
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S163L
TCGA-06-5416
GBM
TCGA
VLTTPCLT
DEG_SCF_FBW7_1
0.1389
p.P186L
TCGA-A5-A0G2
UCEC
TCGA
VLTTPCLT
DEG_SCF_FBW7_1
0.0833
p.P186L
SIDM00175
Melanoma
GDSC
VLTTPCLT
DEG_SCF_FBW7_1
0.0833
p.P186L
CP50-MEL-B
skin
COSMIC
VLTTPCLT
DEG_SCF_FBW7_1
0.0833
p.R173H
TCGA-AA-3949
COAD
TCGA
VLTTPCLT
DEG_SCF_FBW7_1
0.8244
p.R173H
TCGA-AX-A0J1
UCEC
TCGA
VLTTPCLT
DEG_SCF_FBW7_1
0.8244
p.R173H
SIDM00217
Colorectal Carcinoma
GDSC
VLTTPCLT
DEG_SCF_FBW7_1
0.8244
p.R173H
SNU-1040
large_intestine
COSMIC
VLTTPCLT
DEG_SCF_FBW7_1
0.8244
p.W181L
TCGA-F7-7848
HNSC
TCGA
VLTTPCLT
DEG_SCF_FBW7_1
0.2222
p.V164A
TCGA-FF-A7CR
DLBC
TCGA
VLTTPCLT
DEG_SCF_FBW7_1
0.1667
p.R176C
TCGA-FS-A1ZZ
SKCM
TCGA
VLTTPCLT
DEG_SCF_FBW7_1
0.8301
p.R176C
SIDM01283
Esophageal Carcinoma
GDSC
VLTTPCLT
DEG_SCF_FBW7_1
0.8301
p.E171Q
DO590
BLCA
ICGC
VLTTPCLT
DEG_SCF_FBW7_1
0.6744
p.D172N
DO220903
MELA
ICGC
VLTTPCLT
DEG_SCF_FBW7_1
0.6932
p.P163L
DO41235
UCEC
ICGC
VLTTPCLT
DEG_SCF_FBW7_1
0.1389
p.P163L
CP50-MEL-B
skin
COSMIC
VLTTPCLT
DEG_SCF_FBW7_1
0.1389
p.Y182H
SIDM00946
T-Lymphoblastic Leukemia
GDSC
VLTTPCLT
DEG_SCF_FBW7_1
0.1944
p.Y182H
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
VLTTPCLT
DEG_SCF_FBW7_1
0.1944
p.R173C
SIDM01199
Hepatocellular Carcinoma
GDSC
VLTTPCLT
DEG_SCF_FBW7_1
0.8301
p.R173C
SNU-423
liver
COSMIC
VLTTPCLT
DEG_SCF_FBW7_1
0.8301
Drug responses associated with SLA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLTTPCLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13239
Src-like-adapter
DEG_SCF_FBW7_1
170:177
VLTTPCLT
FBXW7
0.776
More...