DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLTTS
Uniprot ID:
Q86UU1
Source protein:
Pleckstrin homology-like domain family B member 1
Source gene:
PHLDB1
Class:
DEG_SPOP_SBC_1
Location:
415:419
E3 ligase:
SPOP
DEGRON score:
0.9716
ASA_SCORE:
87.34
COIL:
0.8886
CONS_SCORE:
0.4381
DSS_SCORE:
0.713
HELIX:
0.0558
FCONS_SCORE:
1.0662
RIG_SCORE:
0.6764
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L416V
TCGA-AG-A01L
READ
TCGA
VLTTS
DEG_SPOP_SBC_1
0.5654
p.R427Q
TCGA-EY-A1GO
UCEC
TCGA
VLTTS
DEG_SPOP_SBC_1
0.1111
p.R427Q
DO41392
UCEC
ICGC
VLTTS
DEG_SPOP_SBC_1
0.1111
p.R427L
TCGA-KQ-A41N
BLCA
TCGA
VLTTS
DEG_SPOP_SBC_1
0.1111
p.R427L
DO223588
BLCA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.1111
p.R407C
DO228941
LICA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.1111
p.G411V
DO229031
LICA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.2222
p.L406F
DO229038
LICA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.0833
p.P410L
DO220875
MELA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.1944
p.G411C
DO37966
SKCM
ICGC
VLTTS
DEG_SPOP_SBC_1
0.2222
p.S412N
SIDM00334
Endometrial Carcinoma
GDSC
VLTTS
DEG_SPOP_SBC_1
0.25
p.S412N
ACH-000879
Endometrial/Uterine Cancer
CCLE
VLTTS
DEG_SPOP_SBC_1
0.25
p.S412N
MFE-296
endometrium
COSMIC
VLTTS
DEG_SPOP_SBC_1
0.25
p.P409A
ACH-002693
Sarcoma
CCLE
VLTTS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PHLDB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86UU1
Pleckstrin homology-like domain family B member 1
DEG_SPOP_SBC_1
415:419
VLTTS
SPOP
0.9716
More...