DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLTTS
Uniprot ID:
Q86UU1
Source protein:
Pleckstrin homology-like domain family B member 1
Source gene:
PHLDB1
Class:
DEG_SPOP_SBC_1
Location:
415:419
E3 ligase:
SPOP
DEGRON score:
0.9716
ASA_SCORE:
87.34
COIL:
0.8886
CONS_SCORE:
0.4381
DSS_SCORE:
0.713
HELIX:
0.0558
FCONS_SCORE:
1.0662
RIG_SCORE:
0.6764
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L416V
TCGA-AG-A01L
READ
TCGA
VLTTS
DEG_SPOP_SBC_1
0.5654
p.S412N
SIDM00334
Endometrial Carcinoma
GDSC
VLTTS
DEG_SPOP_SBC_1
0.25
p.S412N
ACH-000879
Endometrial/Uterine Cancer
CCLE
VLTTS
DEG_SPOP_SBC_1
0.25
p.S412N
MFE-296
endometrium
COSMIC
VLTTS
DEG_SPOP_SBC_1
0.25
p.G411V
DO229031
LICA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.2222
p.G411C
DO37966
SKCM
ICGC
VLTTS
DEG_SPOP_SBC_1
0.2222
p.P410L
DO220875
MELA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.1944
p.P409A
ACH-002693
Sarcoma
CCLE
VLTTS
DEG_SPOP_SBC_1
0.1667
p.R427Q
TCGA-EY-A1GO
UCEC
TCGA
VLTTS
DEG_SPOP_SBC_1
0.1111
p.R427Q
DO41392
UCEC
ICGC
VLTTS
DEG_SPOP_SBC_1
0.1111
p.R427L
TCGA-KQ-A41N
BLCA
TCGA
VLTTS
DEG_SPOP_SBC_1
0.1111
p.R427L
DO223588
BLCA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.1111
p.R407C
DO228941
LICA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.1111
p.L406F
DO229038
LICA
ICGC
VLTTS
DEG_SPOP_SBC_1
0.0833
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Drug responses associated with PHLDB1 mutations
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Cancer
Mutation (In Degron?)
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IC50
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All proteins holding degron of VLTTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86UU1
Pleckstrin homology-like domain family B member 1
DEG_SPOP_SBC_1
415:419
VLTTS
SPOP
0.9716
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