DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VMSST
Uniprot ID:
Q8NHS0
Source protein:
DnaJ homolog subfamily B member 8
Source gene:
DNAJB8
Class:
DEG_SPOP_SBC_1
Location:
182:186
E3 ligase:
SPOP
DEGRON score:
0.9047
ASA_SCORE:
78.74
COIL:
0.5934
CONS_SCORE:
0.6489
DSS_SCORE:
0.4896
HELIX:
0.0098
FCONS_SCORE:
1.2039
RIG_SCORE:
0.6968
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M188I
TCGA-AA-3819
COAD
TCGA
VMSST
DEG_SPOP_SBC_1
0.2778
p.M188I
DO10590
COAD
ICGC
VMSST
DEG_SPOP_SBC_1
0.2778
p.G191D
TCGA-AZ-4615
COAD
TCGA
VMSST
DEG_SPOP_SBC_1
0.1944
p.G191D
DO7977
COAD
ICGC
VMSST
DEG_SPOP_SBC_1
0.1944
p.I189S
TCGA-CC-A8HV
LIHC
TCGA
VMSST
DEG_SPOP_SBC_1
0.25
p.I189S
DO52189
LIHC
ICGC
VMSST
DEG_SPOP_SBC_1
0.25
p.F179C
TCGA-DD-A3A9
LIHC
TCGA
VMSST
DEG_SPOP_SBC_1
0.25
p.F179C
DO44888
LIHC
ICGC
VMSST
DEG_SPOP_SBC_1
0.25
p.S184L
TCGA-FW-A3R5
SKCM
TCGA
VMSST
DEG_SPOP_SBC_1
0.7667
p.S184L
DO37406
SKCM
ICGC
VMSST
DEG_SPOP_SBC_1
0.7667
p.S184L
SIDM00361
Non-Small Cell Lung Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.7667
p.S184L
PC-3_[JPC-3]
lung
COSMIC
VMSST
DEG_SPOP_SBC_1
0.7667
p.N190S
TCGA-GL-A9DE
KIRP
TCGA
VMSST
DEG_SPOP_SBC_1
0.2222
p.N190S
DO51560
KIRP
ICGC
VMSST
DEG_SPOP_SBC_1
0.2222
p.E187D
TCGA-O2-A52N
LUSC
TCGA
VMSST
DEG_SPOP_SBC_1
0.3056
p.E187D
DO219217
LUSC
ICGC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S184A
TCGA-XU-AAXX
THYM
TCGA
VMSST
DEG_SPOP_SBC_1
0.7588
p.T186P
DO227745
COCA
ICGC
VMSST
DEG_SPOP_SBC_1
0.7031
p.H192Q
DO228948
LICA
ICGC
VMSST
DEG_SPOP_SBC_1
0.1667
p.S181L
SIDM01199
Hepatocellular Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM00581
Glioblastoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM00045
Gastric Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM01347
Ovarian Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM01588
Endometrial Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S172P
SIDM01450
Gastric Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.0556
p.S172P
ACH-000898
Gastric Cancer
CCLE
VMSST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with DNAJB8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VMSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NHS0
DnaJ homolog subfamily B member 8
DEG_SPOP_SBC_1
182:186
VMSST
SPOP
0.9047
More...