DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VMSST
Uniprot ID:
Q8NHS0
Source protein:
DnaJ homolog subfamily B member 8
Source gene:
DNAJB8
Class:
DEG_SPOP_SBC_1
Location:
182:186
E3 ligase:
SPOP
DEGRON score:
0.9047
ASA_SCORE:
78.74
COIL:
0.5934
CONS_SCORE:
0.6489
DSS_SCORE:
0.4896
HELIX:
0.0098
FCONS_SCORE:
1.2039
RIG_SCORE:
0.6968
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S184L
TCGA-FW-A3R5
SKCM
TCGA
VMSST
DEG_SPOP_SBC_1
0.7667
p.S184L
DO37406
SKCM
ICGC
VMSST
DEG_SPOP_SBC_1
0.7667
p.S184L
SIDM00361
Non-Small Cell Lung Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.7667
p.S184L
PC-3_[JPC-3]
lung
COSMIC
VMSST
DEG_SPOP_SBC_1
0.7667
p.S184A
TCGA-XU-AAXX
THYM
TCGA
VMSST
DEG_SPOP_SBC_1
0.7588
p.T186P
DO227745
COCA
ICGC
VMSST
DEG_SPOP_SBC_1
0.7031
p.E187D
TCGA-O2-A52N
LUSC
TCGA
VMSST
DEG_SPOP_SBC_1
0.3056
p.E187D
DO219217
LUSC
ICGC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM01199
Hepatocellular Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM00581
Glioblastoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM00045
Gastric Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM01347
Ovarian Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.S181L
SIDM01588
Endometrial Carcinoma
GDSC
VMSST
DEG_SPOP_SBC_1
0.3056
p.M188I
TCGA-AA-3819
COAD
TCGA
VMSST
DEG_SPOP_SBC_1
0.2778
p.M188I
DO10590
COAD
ICGC
VMSST
DEG_SPOP_SBC_1
0.2778
p.I189S
TCGA-CC-A8HV
LIHC
TCGA
VMSST
DEG_SPOP_SBC_1
0.25
p.I189S
DO52189
LIHC
ICGC
VMSST
DEG_SPOP_SBC_1
0.25
p.F179C
TCGA-DD-A3A9
LIHC
TCGA
VMSST
DEG_SPOP_SBC_1
0.25
p.F179C
DO44888
LIHC
ICGC
VMSST
DEG_SPOP_SBC_1
0.25
p.N190S
TCGA-GL-A9DE
KIRP
TCGA
VMSST
DEG_SPOP_SBC_1
0.2222
p.N190S
DO51560
KIRP
ICGC
VMSST
DEG_SPOP_SBC_1
0.2222
p.G191D
TCGA-AZ-4615
COAD
TCGA
VMSST
DEG_SPOP_SBC_1
0.1944
p.G191D
DO7977
COAD
ICGC
VMSST
DEG_SPOP_SBC_1
0.1944
p.H192Q
DO228948
LICA
ICGC
VMSST
DEG_SPOP_SBC_1
0.1667
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Drug responses associated with DNAJB8 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VMSST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NHS0
DnaJ homolog subfamily B member 8
DEG_SPOP_SBC_1
182:186
VMSST
SPOP
0.9047
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