DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VNPHME
Uniprot ID:
P10070
Source protein:
Zinc finger protein GLI2
Source gene:
GLI2
Class:
LIG_APCC_ABBA_1
Location:
122:127
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9835
ASA_SCORE:
60.3667
COIL:
0.5842
CONS_SCORE:
0.4104
DSS_SCORE:
0.4293
HELIX:
0.384
FCONS_SCORE:
1.0463
RIG_SCORE:
0.6804
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P120Q
TCGA-05-4427
LUAD
TCGA
VNPHME
LIG_APCC_ABBA_1
0.2778
p.P120Q
DO23666
LUAD
ICGC
VNPHME
LIG_APCC_ABBA_1
0.2778
p.E112K
TCGA-12-0820
GBM
TCGA
VNPHME
LIG_APCC_ABBA_1
0.0556
p.E112K
DO12838
GBM
ICGC
VNPHME
LIG_APCC_ABBA_1
0.0556
p.Y129F
TCGA-17-Z055
LUAD
TCGA
VNPHME
LIG_APCC_ABBA_1
0.2778
p.S132Y
TCGA-FU-A3HZ
CESC
TCGA
VNPHME
LIG_APCC_ABBA_1
0.6389
p.S132Y
DO6308
CESC
ICGC
VNPHME
LIG_APCC_ABBA_1
0.6389
p.P118L
DO233748
GACA
ICGC
VNPHME
LIG_APCC_ABBA_1
0.2222
p.R131L
DO229028
LICA
ICGC
VNPHME
LIG_APCC_ABBA_1
0.2222
p.S113Y
DO50974
LICA
ICGC
VNPHME
LIG_APCC_ABBA_1
0.0833
p.H119Y
DO220884
MELA
ICGC
VNPHME
LIG_APCC_ABBA_1
0.25
p.H119N
SIDM00391
Plasma Cell Myeloma
GDSC
VNPHME
LIG_APCC_ABBA_1
0.25
p.H119N
ACH-000363
Myeloma
CCLE
VNPHME
LIG_APCC_ABBA_1
0.25
p.H119N
SK-MM-2
haematopoietic_and_lymphoid_tissue
COSMIC
VNPHME
LIG_APCC_ABBA_1
0.25
Drug responses associated with GLI2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNPHME
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10070
Zinc finger protein GLI2
LIG_APCC_ABBA_1
122:127
VNPHME
APC,CDC20,FZR1
0.9835
More...