DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VNPTPGGT
Uniprot ID:
Q7L2E3
Source protein:
ATP-dependent RNA helicase DHX30
Source gene:
DHX30
Class:
DEG_SCF_FBW7_1
Location:
31:38
E3 ligase:
FBXW7
DEGRON score:
0.9749
ASA_SCORE:
73.9
COIL:
0.9083
CONS_SCORE:
0.296
DSS_SCORE:
0.596
HELIX:
0.0678
FCONS_SCORE:
0.9308
RIG_SCORE:
0.6104
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D45Y
TCGA-69-7974
LUAD
TCGA
VNPTPGGT
DEG_SCF_FBW7_1
0.1389
p.S43A
TCGA-AA-3675
COAD
TCGA
VNPTPGGT
DEG_SCF_FBW7_1
0.1944
p.L47F
TCGA-CA-6717
COAD
TCGA
VNPTPGGT
DEG_SCF_FBW7_1
0.0833
p.R44S
TCGA-D3-A2JP
SKCM
TCGA
VNPTPGGT
DEG_SCF_FBW7_1
0.1667
p.P22L
TCGA-DF-A2KS
UCEC
TCGA
VNPTPGGT
DEG_SCF_FBW7_1
0.0833
p.P22L
DO223285
UCEC
ICGC
VNPTPGGT
DEG_SCF_FBW7_1
0.0833
p.P22S
TCGA-EE-A2MU
SKCM
TCGA
VNPTPGGT
DEG_SCF_FBW7_1
0.0833
p.P22S
DO37436
SKCM
ICGC
VNPTPGGT
DEG_SCF_FBW7_1
0.0833
p.R24T
DO219033
BLCA
ICGC
VNPTPGGT
DEG_SCF_FBW7_1
0.1389
p.R25H
DO228430
BRCA
ICGC
VNPTPGGT
DEG_SCF_FBW7_1
0.1667
p.R25H
DO227979
COCA
ICGC
VNPTPGGT
DEG_SCF_FBW7_1
0.1667
p.P22H
DO233215
GACA
ICGC
VNPTPGGT
DEG_SCF_FBW7_1
0.0833
p.V36F
DO229006
LICA
ICGC
VNPTPGGT
DEG_SCF_FBW7_1
0.7068
p.K32E
DO44634
LICA
ICGC
VNPTPGGT
DEG_SCF_FBW7_1
0.7022
p.K32N
DO47743
STAD
ICGC
VNPTPGGT
DEG_SCF_FBW7_1
0.6918
p.L26I
SIDM02021
Esophageal Carcinoma
GDSC
VNPTPGGT
DEG_SCF_FBW7_1
0.1944
p.P24H
SIDM00683
Prostate Carcinoma
GDSC
VNPTPGGT
DEG_SCF_FBW7_1
0.1389
p.P24H
LNCaP-Clone-FGC
prostate
COSMIC
VNPTPGGT
DEG_SCF_FBW7_1
0.1389
p.P22A
SIDM00516
Melanoma
GDSC
VNPTPGGT
DEG_SCF_FBW7_1
0.0833
p.P22A
ACH-002166
Skin Cancer
CCLE
VNPTPGGT
DEG_SCF_FBW7_1
0.0833
p.P22A
MZ7-mel
skin
COSMIC
VNPTPGGT
DEG_SCF_FBW7_1
0.0833
p.T34A
SIDM00839
Colorectal Carcinoma
GDSC
VNPTPGGT
DEG_SCF_FBW7_1
0.7139
p.T34A
LoVo
large_intestine
COSMIC
VNPTPGGT
DEG_SCF_FBW7_1
0.7139
p.P23L
ACH-002059
Leukemia
CCLE
VNPTPGGT
DEG_SCF_FBW7_1
0.1111
p.P23L
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
VNPTPGGT
DEG_SCF_FBW7_1
0.1111
Drug responses associated with DHX30 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNPTPGGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7L2E3
ATP-dependent RNA helicase DHX30
DEG_SCF_FBW7_1
31:38
VNPTPGGT
FBXW7
0.9749
More...