DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPATPLAS
Uniprot ID:
Q8IY92
Source protein:
Structure-specific endonuclease subunit SLX4
Source gene:
SLX4
Class:
DEG_SCF_FBW7_1
Location:
1257:1264
E3 ligase:
FBXW7
DEGRON score:
0.9981
ASA_SCORE:
75.5375
COIL:
0.8945
CONS_SCORE:
0.4057
DSS_SCORE:
0.4762
HELIX:
0.0375
FCONS_SCORE:
1.1477
RIG_SCORE:
0.7621
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1266N
TCGA-A5-A2K5
UCEC
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.2778
p.S1266N
DO41379
UCEC
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.2778
p.R1267H
TCGA-A8-A09Z
BRCA
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.25
p.R1267H
DO5521
BRCA
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.25
p.P1261S
TCGA-EE-A2MS
SKCM
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.6752
p.P1261S
DO37567
SKCM
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.6752
p.E1247K
TCGA-EI-7004
READ
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.0556
p.E1247K
DO36507
READ
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.0556
p.P1261Q
TCGA-ER-A19F
SKCM
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.7035
p.P1261Q
DO37679
SKCM
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.7035
p.S1271F
DO228941
LICA
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.5833
p.A1248D
DO229025
LICA
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.0833
p.T1260P
DO52352
LUSC
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.8142
p.T1260P
DO50659
ORCA
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.8142
p.S1249N
SIDM00951
T-Lymphoblastic Leukemia
GDSC
VPATPLAS
DEG_SCF_FBW7_1
0.1111
p.S1249N
ACH-002222
Leukemia
CCLE
VPATPLAS
DEG_SCF_FBW7_1
0.1111
p.S1249N
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
VPATPLAS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with SLX4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPATPLAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IY92
Structure-specific endonuclease subunit SLX4
DEG_SCF_FBW7_1
1257:1264
VPATPLAS
FBXW7
0.9981
More...