DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPATPLAS
Uniprot ID:
Q8IY92
Source protein:
Structure-specific endonuclease subunit SLX4
Source gene:
SLX4
Class:
DEG_SCF_FBW7_1
Location:
1257:1264
E3 ligase:
FBXW7
DEGRON score:
0.9981
ASA_SCORE:
75.5375
COIL:
0.8945
CONS_SCORE:
0.4057
DSS_SCORE:
0.4762
HELIX:
0.0375
FCONS_SCORE:
1.1477
RIG_SCORE:
0.7621
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1260P
DO52352
LUSC
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.8142
p.T1260P
DO50659
ORCA
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.8142
p.P1261Q
TCGA-ER-A19F
SKCM
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.7035
p.P1261Q
DO37679
SKCM
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.7035
p.P1261S
TCGA-EE-A2MS
SKCM
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.6752
p.P1261S
DO37567
SKCM
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.6752
p.S1271F
DO228941
LICA
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.5833
p.S1266N
TCGA-A5-A2K5
UCEC
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.2778
p.S1266N
DO41379
UCEC
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.2778
p.R1267H
TCGA-A8-A09Z
BRCA
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.25
p.R1267H
DO5521
BRCA
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.25
p.S1249N
SIDM00951
T-Lymphoblastic Leukemia
GDSC
VPATPLAS
DEG_SCF_FBW7_1
0.1111
p.S1249N
ACH-002222
Leukemia
CCLE
VPATPLAS
DEG_SCF_FBW7_1
0.1111
p.S1249N
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
VPATPLAS
DEG_SCF_FBW7_1
0.1111
p.A1248D
DO229025
LICA
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.0833
p.E1247K
TCGA-EI-7004
READ
TCGA
VPATPLAS
DEG_SCF_FBW7_1
0.0556
p.E1247K
DO36507
READ
ICGC
VPATPLAS
DEG_SCF_FBW7_1
0.0556
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Drug responses associated with SLX4 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VPATPLAS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IY92
Structure-specific endonuclease subunit SLX4
DEG_SCF_FBW7_1
1257:1264
VPATPLAS
FBXW7
0.9981
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