DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPATPTTS
Uniprot ID:
Q96KG9
Source protein:
N-terminal kinase-like protein
Source gene:
SCYL1
Class:
DEG_SCF_FBW7_1
Location:
615:622
E3 ligase:
FBXW7
DEGRON score:
0.8705
ASA_SCORE:
84.225
COIL:
0.9355
CONS_SCORE:
0.3013
DSS_SCORE:
0.8164
HELIX:
0.0305
FCONS_SCORE:
1.007
RIG_SCORE:
0.5763
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P619H
TCGA-61-2096
OV
TCGA
VPATPTTS
DEG_SCF_FBW7_1
0.7694
p.P619H
DO29708
OV
ICGC
VPATPTTS
DEG_SCF_FBW7_1
0.7694
p.E605K
TCGA-CV-5436
HNSC
TCGA
VPATPTTS
DEG_SCF_FBW7_1
0.0556
p.E605K
DO15006
HNSC
ICGC
VPATPTTS
DEG_SCF_FBW7_1
0.0556
p.P610T
TCGA-D3-A2JH
SKCM
TCGA
VPATPTTS
DEG_SCF_FBW7_1
0.1944
p.P610T
DO47263
SKCM
ICGC
VPATPTTS
DEG_SCF_FBW7_1
0.1944
p.G623R
TCGA-FW-A3TU
SKCM
TCGA
VPATPTTS
DEG_SCF_FBW7_1
0.3056
p.P616S
TCGA-GN-A8LK
SKCM
TCGA
VPATPTTS
DEG_SCF_FBW7_1
0.5641
p.P616S
DO51259
SKCM
ICGC
VPATPTTS
DEG_SCF_FBW7_1
0.5641
p.T613P
DO228029
EOPC
ICGC
VPATPTTS
DEG_SCF_FBW7_1
0.2778
p.P612H
ACH-002265
Head and Neck Cancer
CCLE
VPATPTTS
DEG_SCF_FBW7_1
0.25
p.P612H
LB771-HNC
upper_aerodigestive_tract
COSMIC
VPATPTTS
DEG_SCF_FBW7_1
0.25
p.E621D
FLO-1
oesophagus
COSMIC
VPATPTTS
DEG_SCF_FBW7_1
0.6758
Drug responses associated with SCYL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPATPTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96KG9
N-terminal kinase-like protein
DEG_SCF_FBW7_1
615:622
VPATPTTS
FBXW7
0.8705
More...