DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPETPDNE
Uniprot ID:
Q9H4L7
Source protein:
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
Source gene:
SMARCAD1
Class:
DEG_SCF_FBW7_2
Location:
68:75
E3 ligase:
FBXW7
DEGRON score:
0.5544
ASA_SCORE:
93.775
COIL:
0.8623
CONS_SCORE:
0.2385
DSS_SCORE:
0.664
HELIX:
0.1178
FCONS_SCORE:
0.9244
RIG_SCORE:
0.6594
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T63S
TCGA-19-5956
GBM
TCGA
VPETPDNE
DEG_SCF_FBW7_2
0.6389
p.T63S
DO13863
GBM
ICGC
VPETPDNE
DEG_SCF_FBW7_2
0.6389
p.P69A
TCGA-DS-A1OA
CESC
TCGA
VPETPDNE
DEG_SCF_FBW7_2
0.6392
p.P69A
DO6341
CESC
ICGC
VPETPDNE
DEG_SCF_FBW7_2
0.6392
p.S66F
TCGA-EY-A1GI
UCEC
TCGA
VPETPDNE
DEG_SCF_FBW7_2
0.7222
p.S66F
DO41211
UCEC
ICGC
VPETPDNE
DEG_SCF_FBW7_2
0.7222
p.Q71E
DO49753
BLCA
ICGC
VPETPDNE
DEG_SCF_FBW7_2
0.6744
p.E64D
DO233145
GACA
ICGC
VPETPDNE
DEG_SCF_FBW7_2
0.2222
p.K83R
DO20942
KIRP
ICGC
VPETPDNE
DEG_SCF_FBW7_2
0.1111
p.G74C
DO229018
LICA
ICGC
VPETPDNE
DEG_SCF_FBW7_2
0.76
p.W77L
DO229026
LICA
ICGC
VPETPDNE
DEG_SCF_FBW7_2
0.7222
p.D65Y
SIDM00500
Colorectal Carcinoma
GDSC
VPETPDNE
DEG_SCF_FBW7_2
0.25
p.D65Y
ACH-000959
Colon/Colorectal Cancer
CCLE
VPETPDNE
DEG_SCF_FBW7_2
0.25
p.Y70S
ACH-001134
Lymphoma
CCLE
VPETPDNE
DEG_SCF_FBW7_2
0.712
Drug responses associated with SMARCAD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPETPDNE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H4L7
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
DEG_SCF_FBW7_2
68:75
VPETPDNE
FBXW7
0.5544
More...