DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPGTPPSS
Uniprot ID:
Q15648
Source protein:
Mediator of RNA polymerase II transcription subunit 1
Source gene:
MED1
Class:
DEG_SCF_FBW7_1
Location:
1212:1219
E3 ligase:
FBXW7
DEGRON score:
0.9932
ASA_SCORE:
91.1375
COIL:
0.9688
CONS_SCORE:
0.3834
DSS_SCORE:
0.7408
HELIX:
0.0149
FCONS_SCORE:
1.0087
RIG_SCORE:
0.5285
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1224L
TCGA-64-1677
LUAD
TCGA
VPGTPPSS
DEG_SCF_FBW7_1
0.1944
p.P1224L
DO23996
LUAD
ICGC
VPGTPPSS
DEG_SCF_FBW7_1
0.1944
p.S1227L
TCGA-DK-A3WW
BLCA
TCGA
VPGTPPSS
DEG_SCF_FBW7_1
0.5556
p.S1227L
DO481
BLCA
ICGC
VPGTPPSS
DEG_SCF_FBW7_1
0.5556
p.P1208A
TCGA-E5-A4TZ
BLCA
TCGA
VPGTPPSS
DEG_SCF_FBW7_1
0.2222
p.P1208A
DO44055
BLCA
ICGC
VPGTPPSS
DEG_SCF_FBW7_1
0.2222
p.S1218C
TCGA-G2-A2EF
BLCA
TCGA
VPGTPPSS
DEG_SCF_FBW7_1
0.7541
p.S1218C
DO726
BLCA
ICGC
VPGTPPSS
DEG_SCF_FBW7_1
0.7541
p.T1215N
DO228926
LICA
ICGC
VPGTPPSS
DEG_SCF_FBW7_1
0.8166
p.P1208Q
DO228952
LICA
ICGC
VPGTPPSS
DEG_SCF_FBW7_1
0.2222
p.I1225F
SIDM00654
Small Cell Lung Carcinoma
GDSC
VPGTPPSS
DEG_SCF_FBW7_1
0.1667
p.I1225F
ACH-000866
Lung Cancer
CCLE
VPGTPPSS
DEG_SCF_FBW7_1
0.1667
p.I1225F
NCI-H1048
lung
COSMIC
VPGTPPSS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with MED1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPGTPPSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15648
Mediator of RNA polymerase II transcription subunit 1
DEG_SCF_FBW7_1
1212:1219
VPGTPPSS
FBXW7
0.9932
More...