DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPGTPRVT
Uniprot ID:
P10515
Source protein:
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
Source gene:
DLAT
Class:
DEG_SCF_FBW7_1
Location:
28:35
E3 ligase:
FBXW7
DEGRON score:
0.9772
ASA_SCORE:
59.6
COIL:
0.771
CONS_SCORE:
0.2282
DSS_SCORE:
0.545
HELIX:
0.1173
FCONS_SCORE:
1.0827
RIG_SCORE:
0.7002
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V34M
TCGA-44-4112
LUAD
TCGA
VPGTPRVT
DEG_SCF_FBW7_1
0.6097
p.V34M
DO233259
GACA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.6097
p.V34M
DO26032
LUAD
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.6097
p.Q26H
TCGA-BG-A0VW
UCEC
TCGA
VPGTPRVT
DEG_SCF_FBW7_1
0.2778
p.Q26H
DO40843
UCEC
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.2778
p.P42T
TCGA-EE-A29E
SKCM
TCGA
VPGTPRVT
DEG_SCF_FBW7_1
0.1389
p.P42T
DO37831
SKCM
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1389
p.T23K
TCGA-FD-A5BZ
BLCA
TCGA
VPGTPRVT
DEG_SCF_FBW7_1
0.1944
p.T23K
DO44052
BLCA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1944
p.P40Q
TCGA-FS-A1ZZ
SKCM
TCGA
VPGTPRVT
DEG_SCF_FBW7_1
0.1944
p.P40Q
DO37412
SKCM
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1944
p.A43V
DO229010
COCA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1111
p.A43V
DO229013
COCA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1111
p.A43V
DO229016
COCA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1111
p.A43V
DO229003
COCA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1111
p.A43V
DO229005
COCA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1111
p.A43V
DO229038
LICA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1111
p.A43V
DO230927
LUSC
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.1111
p.V28L
DO229038
LICA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.5654
p.G39V
DO229037
LICA
ICGC
VPGTPRVT
DEG_SCF_FBW7_1
0.2222
Drug responses associated with DLAT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPGTPRVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10515
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
DEG_SCF_FBW7_1
28:35
VPGTPRVT
FBXW7
0.9772
More...