DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VPIFKD
Uniprot ID:
P48506
Source protein:
Glutamate--cysteine ligase catalytic subunit
Source gene:
GCLC
Class:
LIG_APCC_ABBA_1
Location:
205:210
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.983
ASA_SCORE:
58.7667
COIL:
0.6722
CONS_SCORE:
0.6463
DSS_SCORE:
0.4017
HELIX:
0.1097
FCONS_SCORE:
1.1311
RIG_SCORE:
0.8157
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R196K
TCGA-17-Z027
LUAD
TCGA
VPIFKD
LIG_APCC_ABBA_1
0.0833
p.K211N
TCGA-F5-6814
READ
TCGA
VPIFKD
LIG_APCC_ABBA_1
0.75
p.K211N
DO36556
READ
ICGC
VPIFKD
LIG_APCC_ABBA_1
0.75
p.S215P
DO1092
BRCA
ICGC
VPIFKD
LIG_APCC_ABBA_1
0.6389
p.I218V
SIDM00845
Burkitt's Lymphoma
GDSC
VPIFKD
LIG_APCC_ABBA_1
0.1111
p.P216A
SIDM00505
Pancreatic Carcinoma
GDSC
VPIFKD
LIG_APCC_ABBA_1
0.1667
p.P216A
MIA-PaCa-2
pancreas
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.1667
p.I214V
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.2222
p.G206E
Mewo
skin
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.7199
p.A217D
KMOE-2
haematopoietic_and_lymphoid_tissue
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.1389
p.V199M
LU-165
lung
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.1667
p.D213Y
OVK-18
ovary
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.25
p.V214M
LU-165
lung
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.2222
p.Q198H
BC-3
haematopoietic_and_lymphoid_tissue
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.1389
p.M207I
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.7618
p.N219S
IGROV-1
ovary
COSMIC
VPIFKD
LIG_APCC_ABBA_1
0.0833
Drug responses associated with GCLC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPIFKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48506
Glutamate--cysteine ligase catalytic subunit
LIG_APCC_ABBA_1
205:210
VPIFKD
APC,CDC20,FZR1
0.983
More...