DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPLFPD
Uniprot ID:
Q9BQT9
Source protein:
Calsyntenin-3
Source gene:
CLSTN3
Class:
LIG_APCC_ABBA_1
Location:
664:669
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8998
ASA_SCORE:
55.6833
COIL:
0.6858
CONS_SCORE:
0.5532
DSS_SCORE:
0.2702
HELIX:
0.0277
FCONS_SCORE:
1.4159
RIG_SCORE:
0.8284
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P665T
TCGA-56-8622
LUSC
TCGA
VPLFPD
LIG_APCC_ABBA_1
0.5919
p.P665T
TCGA-BG-A0LX
UCEC
TCGA
VPLFPD
LIG_APCC_ABBA_1
0.5919
p.P665T
DO45449
LUSC
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.5919
p.P665T
DO41919
UCEC
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.5919
p.P668T
TCGA-AJ-A3BG
UCEC
TCGA
VPLFPD
LIG_APCC_ABBA_1
0.5919
p.P668T
DO42633
UCEC
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.5919
p.E659D
TCGA-ER-A19N
SKCM
TCGA
VPLFPD
LIG_APCC_ABBA_1
0.1944
p.S675F
TCGA-EY-A1GH
UCEC
TCGA
VPLFPD
LIG_APCC_ABBA_1
0.1667
p.S675F
DO40972
UCEC
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.1667
p.Q671K
TCGA-S4-A8RP
PAAD
TCGA
VPLFPD
LIG_APCC_ABBA_1
0.2778
p.R665H
DO233634
GACA
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.8244
p.R665H
DO224752
PACA
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.8244
p.H662N
DO20653
KIRC
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.2778
p.P665S
DO222702
MELA
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.5641
p.E671D
DO37452
SKCM
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.2778
p.S658R
DO51267
SKCM
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.1667
p.A661T
DO42608
UCEC
ICGC
VPLFPD
LIG_APCC_ABBA_1
0.25
p.T661A
SIDM00082
Melanoma
GDSC
VPLFPD
LIG_APCC_ABBA_1
0.25
p.T661A
ACH-001190
Skin Cancer
CCLE
VPLFPD
LIG_APCC_ABBA_1
0.25
p.T661A
SK-MEL-2
skin
COSMIC
VPLFPD
LIG_APCC_ABBA_1
0.25
p.E659K
SIDM00013
Melanoma
GDSC
VPLFPD
LIG_APCC_ABBA_1
0.1944
p.E659K
ACH-002387
Skin Cancer
CCLE
VPLFPD
LIG_APCC_ABBA_1
0.1944
p.G663S
ACH-002680
Brain Cancer
CCLE
VPLFPD
LIG_APCC_ABBA_1
0.3056
p.T673A
SK-MEL-2
skin
COSMIC
VPLFPD
LIG_APCC_ABBA_1
0.2222
p.Q654K
SNU-175
large_intestine
COSMIC
VPLFPD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with CLSTN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPLFPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BQT9
Calsyntenin-3
LIG_APCC_ABBA_1
664:669
VPLFPD
APC,CDC20,FZR1
0.8998
More...