DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPLFSD
Uniprot ID:
Q96LR7
Source protein:
Uncharacterized protein C2orf50
Source gene:
C2orf50
Class:
LIG_APCC_ABBA_1
Location:
112:117
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9907
ASA_SCORE:
69.6833
COIL:
0.8792
CONS_SCORE:
0.8407
DSS_SCORE:
0.5276
HELIX:
0.0447
FCONS_SCORE:
1.0184
RIG_SCORE:
0.7213
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P109S
TCGA-A6-5661
COAD
TCGA
VPLFSD
LIG_APCC_ABBA_1
0.25
p.P109S
DO8634
COAD
ICGC
VPLFSD
LIG_APCC_ABBA_1
0.25
p.S116L
TCGA-D1-A17Q
UCEC
TCGA
VPLFSD
LIG_APCC_ABBA_1
0.6556
p.S116L
TCGA-Q1-A73O
CESC
TCGA
VPLFSD
LIG_APCC_ABBA_1
0.6556
p.S116L
DO51612
CESC
ICGC
VPLFSD
LIG_APCC_ABBA_1
0.6556
p.S116L
DO41903
UCEC
ICGC
VPLFSD
LIG_APCC_ABBA_1
0.6556
p.E104D
DO229018
LICA
ICGC
VPLFSD
LIG_APCC_ABBA_1
0.1111
p.D117N
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
VPLFSD
LIG_APCC_ABBA_1
0.6932
p.D117N
ACH-000929
Lung Cancer
CCLE
VPLFSD
LIG_APCC_ABBA_1
0.6932
Drug responses associated with C2orf50 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPLFSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96LR7
Uncharacterized protein C2orf50
LIG_APCC_ABBA_1
112:117
VPLFSD
APC,CDC20,FZR1
0.9907
More...