DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VPMYEE
Uniprot ID:
Q07157
Source protein:
Tight junction protein ZO-1
Source gene:
TJP1
Class:
LIG_APCC_ABBA_1
Location:
1084:1089
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9987
ASA_SCORE:
77.5833
COIL:
0.702
CONS_SCORE:
0.3209
DSS_SCORE:
0.3509
HELIX:
0.2728
FCONS_SCORE:
1.1326
RIG_SCORE:
0.7726
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1090H
TCGA-D8-A27M
BRCA
TCGA
VPMYEE
LIG_APCC_ABBA_1
0.3056
p.Q1090H
DO1380
BRCA
ICGC
VPMYEE
LIG_APCC_ABBA_1
0.3056
p.E1089D
SIDM00845
Burkitt's Lymphoma
GDSC
VPMYEE
LIG_APCC_ABBA_1
0.5647
p.R1077H
SIDM01145
Gastric Carcinoma
GDSC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.R1077H
SIDM01181
Hepatocellular Carcinoma
GDSC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.R1077H
SIDM01368
Gastric Carcinoma
GDSC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.R1077H
SIDM01394
Kidney Carcinoma
GDSC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.R1077H
SIDM01574
Plasma Cell Myeloma
GDSC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.R1077S
SIDM00097
Breast Carcinoma
GDSC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.R1077S
SIDM00861
Ovarian Carcinoma
GDSC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.R1077S
SIDM01613
Colorectal Carcinoma
GDSC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.R1077S
ES-2
ovary
COSMIC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.R1077S
T47D
breast
COSMIC
VPMYEE
LIG_APCC_ABBA_1
0.1389
p.A1078T
ACH-000674
Gastric Cancer
CCLE
VPMYEE
LIG_APCC_ABBA_1
0.1667
p.A1078T
NUGC-4
stomach
COSMIC
VPMYEE
LIG_APCC_ABBA_1
0.1667
p.Y1099H
GP5d
large_intestine
COSMIC
VPMYEE
LIG_APCC_ABBA_1
0.0556
p.A1074T
NUGC-4
stomach
COSMIC
VPMYEE
LIG_APCC_ABBA_1
0.5
Drug responses associated with TJP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPMYEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q07157
Tight junction protein ZO-1
LIG_APCC_ABBA_1
1084:1089
VPMYEE
APC,CDC20,FZR1
0.9987
More...