DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VPMYTD
Uniprot ID:
Q96EK7
Source protein:
Constitutive coactivator of peroxisome proliferator-activated receptor gamma
Source gene:
FAM120B
Class:
LIG_APCC_ABBA_1
Location:
437:442
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8922
ASA_SCORE:
100.2167
COIL:
0.9338
CONS_SCORE:
0.4589
DSS_SCORE:
0.7437
HELIX:
0.024
FCONS_SCORE:
0.9313
RIG_SCORE:
0.689
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y452H
TCGA-06-5416
GBM
TCGA
VPMYTD
LIG_APCC_ABBA_1
0.5
p.D442Y
TCGA-AP-A0LM
UCEC
TCGA
VPMYTD
LIG_APCC_ABBA_1
0.7325
p.S431P
DO1076
BRCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.1667
p.S431P
DO224668
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.1667
p.S431P
DO224661
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.1667
p.S431P
DO222888
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.1667
p.A433P
DO230334
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.2222
p.A433P
DO224620
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.2222
p.A433P
DO222804
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.2222
p.A433P
DO222856
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.2222
p.A433P
DO229505
LAML
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.2222
p.A433P
DO51021
LAML
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.2222
p.D442G
DO224668
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.7198
p.D442G
DO224661
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.7198
p.D442G
DO222790
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.7198
p.D442G
DO222888
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.7198
p.D442G
DO35964
PBCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.7198
p.P445A
DO222888
COCA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.25
p.A433S
DO228571
GACA
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.2222
p.Y452C
DO229505
LAML
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.5
p.E436G
DO50793
LIRI
ICGC
VPMYTD
LIG_APCC_ABBA_1
0.3056
p.E436G
ACH-000209
Bile Duct Cancer
CCLE
VPMYTD
LIG_APCC_ABBA_1
0.3056
p.E436G
ACH-000467
Colon/Colorectal Cancer
CCLE
VPMYTD
LIG_APCC_ABBA_1
0.3056
p.E436G
HCC-56
large_intestine
COSMIC
VPMYTD
LIG_APCC_ABBA_1
0.3056
p.E443V
SIDM00852
Glioma
GDSC
VPMYTD
LIG_APCC_ABBA_1
0.3056
p.E443V
H4
central_nervous_system
COSMIC
VPMYTD
LIG_APCC_ABBA_1
0.3056
p.Q434R
SIDM00380
Acute Myeloid Leukemia
GDSC
VPMYTD
LIG_APCC_ABBA_1
0.25
p.Q434R
SKM-1
haematopoietic_and_lymphoid_tissue
COSMIC
VPMYTD
LIG_APCC_ABBA_1
0.25
p.E448G
HCC-56
large_intestine
COSMIC
VPMYTD
LIG_APCC_ABBA_1
0.1667
p.E432V
H4
central_nervous_system
COSMIC
VPMYTD
LIG_APCC_ABBA_1
0.1944
Drug responses associated with FAM120B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPMYTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96EK7
Constitutive coactivator of peroxisome proliferator-activated receptor gamma
LIG_APCC_ABBA_1
425:430
VPMYTD
APC,CDC20,FZR1
0.9859
More...
Q96EK7
Constitutive coactivator of peroxisome proliferator-activated receptor gamma
LIG_APCC_ABBA_1
437:442
VPMYTD
APC,CDC20,FZR1
0.8922
More...