DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPPFMD
Uniprot ID:
Q6UWI4
Source protein:
Protein shisa-2 homolog
Source gene:
SHISA2
Class:
LIG_APCC_ABBA_1
Location:
262:267
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.922
ASA_SCORE:
63.5667
COIL:
0.7657
CONS_SCORE:
0.6738
DSS_SCORE:
0.4591
HELIX:
0.1862
FCONS_SCORE:
1.1397
RIG_SCORE:
0.7635
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P258L
TCGA-91-6828
LUAD
TCGA
VPPFMD
LIG_APCC_ABBA_1
0.2222
p.P258L
DO26150
LUAD
ICGC
VPPFMD
LIG_APCC_ABBA_1
0.2222
p.P264R
TCGA-B5-A3FA
UCEC
TCGA
VPPFMD
LIG_APCC_ABBA_1
0.7512
p.P264R
DO52402
UCEC
ICGC
VPPFMD
LIG_APCC_ABBA_1
0.7512
p.Q277H
TCGA-BQ-5893
KIRP
TCGA
VPPFMD
LIG_APCC_ABBA_1
0.0556
p.Q277H
DO20895
KIRP
ICGC
VPPFMD
LIG_APCC_ABBA_1
0.0556
p.V252M
TCGA-BR-8485
STAD
TCGA
VPPFMD
LIG_APCC_ABBA_1
0.0556
p.V252M
DO47823
STAD
ICGC
VPPFMD
LIG_APCC_ABBA_1
0.0556
p.D255N
TCGA-FS-A1ZA
SKCM
TCGA
VPPFMD
LIG_APCC_ABBA_1
0.1389
p.D255N
DO37551
SKCM
ICGC
VPPFMD
LIG_APCC_ABBA_1
0.1389
p.G268D
TCGA-HU-A4H3
STAD
TCGA
VPPFMD
LIG_APCC_ABBA_1
0.3056
p.G268D
DO47903
STAD
ICGC
VPPFMD
LIG_APCC_ABBA_1
0.3056
p.D267N
DO220906
MELA
ICGC
VPPFMD
LIG_APCC_ABBA_1
0.6932
p.G268S
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
VPPFMD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with SHISA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPPFMD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6UWI4
Protein shisa-2 homolog
LIG_APCC_ABBA_1
262:267
VPPFMD
APC,CDC20,FZR1
0.922
More...